Pairwise Alignments

Query, 582 a.a., lipid A export ATP-binding/permease MsbA from Vibrio cholerae E7946 ATCC 55056

Subject, 651 a.a., ATM1-type heavy metal exporter from Xanthobacter sp. DMC5

 Score =  278 bits (710), Expect = 6e-79
 Identities = 177/492 (35%), Positives = 272/492 (55%), Gaps = 15/492 (3%)

Query: 92  VSGNVVMQMRRRLFNHFMHMPVRFFDQESTGGL---LSRITYDSEQVAGATSRALVSIVR 148
           V+ N V ++    F H   + +RF  +  TGGL   L R     E +    +  L   + 
Sbjct: 122 VALNAVRRLAMETFEHMHALSLRFHLERKTGGLTRVLERARSGIETIVRMLALQLAPTIV 181

Query: 149 EGASIIGLLTLMFWNSWQLSLVLIVVAPVVAFAI-SFVSKRFR-KISRNMQTAMGHVTSS 206
           E   ++G+L   F   W+   V +V A VV +++ ++V+  +R  I + M  +     + 
Sbjct: 182 ELVMVLGVLLFAF--DWRY--VAVVSATVVLYSLFTYVASEWRLAIRKEMNESDTDANTK 237

Query: 207 AEQMLKGHKVVLSYGGQEVERKRFDKVSNSMRQQTMKLVSAQSIADPVIQMIASLALFAV 266
           A   L  ++ V  +G +  E  R+D+      + T+   ++ +  +    +I S+ L AV
Sbjct: 238 AIDSLLNYETVKYFGAERWETARYDRSMARYEKATVNTYTSLAWLNAGQALIFSIGLAAV 297

Query: 267 LFLASVDSIRAELTPGTFTVVFSAMFGLMRPLKALTSVTSEFQRGMAACQTLFGLMDLET 326
           + +  +D      T G+F +V + M     PL  L  +  E ++ +   + +F ++ +  
Sbjct: 298 MVMCVLDIRAGRQTVGSFVMVNAMMIQFYIPLNFLGFIYREIKQAIVDIEAMFAVLQVAP 357

Query: 327 ERDNGKYEAERV--NGEVDVKDVTFTYQ-GKEKPALSHVSFSIPQGKTVALVGRSGSGKS 383
           E  +     + V   G V  +DV F+Y  G+E   L  +SF +P G+TVA+VG SG+GKS
Sbjct: 358 EVTDRPGAPDLVVSGGTVRFEDVRFSYDAGRE--ILKGISFEVPAGRTVAIVGPSGAGKS 415

Query: 384 TIANLFTRFYDVDSGSICLDGHDVRDYKLTNLRRHFALVSQNVHLFNDTIANNIAYAAEG 443
           T++ L  RFYDV  G I +DG D+R+    +LR    +V Q+  LFNDTIA NI Y    
Sbjct: 416 TLSRLLFRFYDVSGGRITIDGQDLREVSQESLRAAIGMVPQDTVLFNDTIAYNIRYGRPA 475

Query: 444 EYTREQIEQAARQAHAMEFIENMPQGLDTVIGENGTSLSGGQRQRVAIARALLRDAPVLI 503
             +  ++E+AAR A    FI   P+G  T +GE G  LSGG++QRVAIAR LL+  P+L+
Sbjct: 476 A-SEAEVEEAARLARIDGFIRATPKGFKTEVGERGLKLSGGEKQRVAIARTLLKAPPILV 534

Query: 504 LDEATSALDTESERAIQAALDELQKNKTVLVIAHRLSTIEQADEILVVDEGEIIERGRHA 563
           LDEATSALD+ +E+ IQ ALD + + +T LVIAHRLST+  ADEILV+ +G++ ERG HA
Sbjct: 535 LDEATSALDSHTEKEIQDALDRVSEGRTTLVIAHRLSTVVSADEILVLADGKVAERGCHA 594

Query: 564 DLLAQDGAYAQL 575
           +LLA+ G YA L
Sbjct: 595 ELLAKGGLYAAL 606