Pairwise Alignments

Query, 582 a.a., lipid A export ATP-binding/permease MsbA from Vibrio cholerae E7946 ATCC 55056

Subject, 673 a.a., Efflux ABC transporter, permease/ATP-binding protein Reut_A2584 from Variovorax sp. SCN45

 Score =  303 bits (775), Expect = 2e-86
 Identities = 194/586 (33%), Positives = 314/586 (53%), Gaps = 18/586 (3%)

Query: 5   SDESNWQTFKRLWTYIRLYKAGLVVSTIALVINAAADTYMISLLKPLLDE---GFGNAES 61
           S  S W    RL  + + Y+  L++  +  +I+ AA      L  PL+D+    F N + 
Sbjct: 60  SPPSTW-VLLRLGRFAKPYRKQLILGFVLTLISTAATLVPPYLTIPLMDDILIPFQNGQK 118

Query: 62  -NFLRILPFMILGLMFVRGLSGF----ASSYCLSWVSGNVVMQMRRRLFNHFMHMPVRFF 116
            + +R+   + LG + V  L G+    A +Y L+ VS  +   +R   + H + +P+ +F
Sbjct: 119 IDTMRV--GLYLGGLLVAALVGWGLGWARTYLLALVSERIGADLRTTTYEHLLTLPLDYF 176

Query: 117 DQESTGGLLSRITYDSEQVAGATSRALVSIVREGASIIGLLTLMFWNSWQLSLVLIVVAP 176
             + TG L++RI  +++++    S   +    +   I+    ++   +  L++V +V  P
Sbjct: 177 GGKRTGDLMARIGSETDRINVFLSLHALDFANDVLMIVMTAVILISINPLLAVVTLVPLP 236

Query: 177 VVAFAISFVSKRFRKISRNMQTAMGHVTSSAEQMLKGHKVVLSYGGQEVERKRFDKVSNS 236
            +A+ I  V  R R     +      VT+     + G +VV ++  +  E +RF +V+N+
Sbjct: 237 FIAWMIHVVRDRLRTGFEKIDRVWSEVTNVLADTIPGIRVVKAFAQERREAERF-RVANA 295

Query: 237 MRQQTM-KLVSAQSIADPVIQMIASLALFAVLFLASVDSIRAELTPGTFTVVFSAMFGLM 295
              Q   KL    S+  P + ++  + L  V         R  +T G  T   + +    
Sbjct: 296 YNLQVNDKLNRTWSLFTPTVSLLTEIGLLVVWAFGIWQVARGSITVGVLTAFIAYIGRFY 355

Query: 296 RPLKALTSVTSEFQRGMAACQTLFGLMD--LETERDNGKYEAERVNGEVDVKDVTFTYQG 353
             L +++ + S  Q+  A  + +F ++D            + ERV G +++  + F Y  
Sbjct: 356 TRLDSMSRIVSVTQKAAAGAKRIFDILDHVSNVPEPANPVKVERVQGRIEMSGLGFRYGS 415

Query: 354 KEKPALSHVSFSIPQGKTVALVGRSGSGKSTIANLFTRFYDVDSGSICLDGHDVRDYKLT 413
           +    +  +   I  G+ + LVG SGSGKST+ NL  RFYDV  G+I +DG D+R + + 
Sbjct: 416 RA--VIHDLDLVIEPGEMIGLVGHSGSGKSTLVNLICRFYDVTDGAIKVDGTDIRRFAVA 473

Query: 414 NLRRHFALVSQNVHLFNDTIANNIAYAAEGEYTREQIEQAARQAHAMEFIENMPQGLDTV 473
           + RRH  LV Q   LF  TIA NIAY  + + TRE+I  AAR AHA +FI  +  G D++
Sbjct: 474 DYRRHVGLVLQEPFLFFGTIAQNIAYG-KPDATREEIVAAARAAHAHDFILRLQHGYDSL 532

Query: 474 IGENGTSLSGGQRQRVAIARALLRDAPVLILDEATSALDTESERAIQAALDELQKNKTVL 533
           +GE G  LSGG+RQR++IARALL D  +LILDEATSA+DTE+E+ IQ ALD L + +T +
Sbjct: 533 VGERGQGLSGGERQRISIARALLIDPRILILDEATSAVDTETEKEIQKALDNLVQGRTTI 592

Query: 534 VIAHRLSTIEQADEILVVDEGEIIERGRHADLLAQDGAYAQLHRIQ 579
            IAHRLST+ +AD ++V+D GE++E G H  L+A+ GAY +L++ Q
Sbjct: 593 AIAHRLSTLRKADRLVVMDRGEVVEVGPHDALMAKQGAYWRLYQAQ 638