Pairwise Alignments

Query, 582 a.a., lipid A export ATP-binding/permease MsbA from Vibrio cholerae E7946 ATCC 55056

Subject, 594 a.a., ABC transporter from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  286 bits (733), Expect = 1e-81
 Identities = 172/587 (29%), Positives = 320/587 (54%), Gaps = 19/587 (3%)

Query: 11  QTFKRLWTYIRLYKAGLVVSTIALVIN-------AAADTYMISLLKPLLD-----EGFGN 58
           ++ + L  Y+  YK  L++  I  +I+       A    Y  +L+K  ++     +G   
Sbjct: 2   KSLRYLNKYLLKYKYRLLLGLIFTIISNFFQILPAQVVRYAFNLIKEGINLHGLYKGMAQ 61

Query: 59  AE------SNFLRILPFMILGLMFVRGLSGFASSYCLSWVSGNVVMQMRRRLFNHFMHMP 112
            E      +  + +   +IL +  +RG+  F     +  +S  +   ++  +++H+  +P
Sbjct: 62  QEVVYDVFTRSILVYGVIILLMALLRGVFLFFVRQTIIVMSRLIENDLKNEIYDHYQSLP 121

Query: 113 VRFFDQESTGGLLSRITYDSEQVAGATSRALVSIVREGASIIGLLTLMFWNSWQLSLVLI 172
           + F+ + +TG L++RI+ D  +V      A++  +      + ++  M   + +L+L  +
Sbjct: 122 LSFYRRNNTGDLMARISEDVSRVRMYVGPAIMYGMNLVVLFLMVIPYMLSVNVKLTLYTL 181

Query: 173 VVAPVVAFAISFVSKRFRKISRNMQTAMGHVTSSAEQMLKGHKVVLSYGGQEVERKRFDK 232
           +  PV+A +I +V+   ++ S  +Q ++  + +  ++   G +V+ S+  +E     F  
Sbjct: 182 IPLPVLAISIYYVNNIIQRKSDEIQRSLSGINTFVQEAFSGIRVIKSFVREEDSHNNFTT 241

Query: 233 VSNSMRQQTMKLVSAQSIADPVIQMIASLALFAVLFLASVDSIRAELTPGTFTVVFSAMF 292
            SN+ + ++++L    S+  P++  +  L+    +++   + I   +T G        + 
Sbjct: 242 ASNTYKDKSLELNFVNSLFFPLVLFLVGLSTIITVYIGGQEVINGSITTGNIAEFIIYVN 301

Query: 293 GLMRPLKALTSVTSEFQRGMAACQTLFGLMDLETERDNGKYEAERVNGEVDVKDVTFTYQ 352
            L  P+ +L    S  QR  A+ + +   +  +      +  ++ + G++  ++V F Y 
Sbjct: 302 MLTWPVTSLGWTASLVQRAAASQERINEFLHTKNNIVPRENISKELVGDIRFENVDFVYP 361

Query: 353 GKEKPALSHVSFSIPQGKTVALVGRSGSGKSTIANLFTRFYDVDSGSICLDGHDVRDYKL 412
                AL  VSFSI  G+T+A++G +GSGKSTIANL  R YD   G + +DG DVRDY L
Sbjct: 362 DTGIHALRQVSFSIRHGETLAVIGNTGSGKSTIANLLPRMYDATGGRVLIDGVDVRDYNL 421

Query: 413 TNLRRHFALVSQNVHLFNDTIANNIAYAAEGEYTREQIEQAARQAHAMEFIENMPQGLDT 472
            +LR     V Q+V LF+D+I NNI +      T EQ+ Q+A+ A   E I   P+  DT
Sbjct: 422 HSLRSQIGYVPQDVFLFSDSIRNNIGFGLPS-ITEEQMVQSAKDADVYENIMRFPEKFDT 480

Query: 473 VIGENGTSLSGGQRQRVAIARALLRDAPVLILDEATSALDTESERAIQAALDELQKNKTV 532
            +GE G +LSGGQ+QRV+IARAL+R+  +LILD++ SA+DT++E AI  +L  + K++T 
Sbjct: 481 KLGERGITLSGGQKQRVSIARALVREPSILILDDSLSAVDTKTENAILNSLRRIMKDRTS 540

Query: 533 LVIAHRLSTIEQADEILVVDEGEIIERGRHADLLAQDGAYAQLHRIQ 579
           ++I+HR+S+++ AD ILV+++GEI++ G H +L++++G Y QL+  Q
Sbjct: 541 IIISHRVSSVKLADRILVMEDGEIVQHGTHEELISREGLYKQLYERQ 587