Pairwise Alignments

Query, 582 a.a., lipid A export ATP-binding/permease MsbA from Vibrio cholerae E7946 ATCC 55056

Subject, 572 a.a., ABC transporter ATP-binding protein/permease from Pectobacterium carotovorum WPP14

 Score =  314 bits (805), Expect = 5e-90
 Identities = 186/571 (32%), Positives = 307/571 (53%), Gaps = 4/571 (0%)

Query: 14  KRLWTYIRLYKAGLVVSTIALVINAAADTYMISLLKPLLDEGFGNAESNFLRILPFMILG 73
           +R ++Y   YK   V+     +I    +      +K  +D+     + + + +    +L 
Sbjct: 3   RRFFSYYSPYKGLFVLDFGCAIIAGLLELGFPMAIKAFIDKLLPAQDWSLILLASVALLA 62

Query: 74  LMFVRGLSGFASSYCLSWVSGNVVMQMRRRLFNHFMHMPVRFFDQESTGGLLSRITYDSE 133
           +  +        +Y    +   +   MRR+ F H  ++P R++D   TG +++ +T D E
Sbjct: 63  VYLLNTALMAIVNYWGHALGVGIETDMRRQAFEHLQNLPFRYYDNMKTGHIITHVTKDLE 122

Query: 134 QVAGATSRALVSIVREGASIIGLLTLMFWNSWQLSLVLIVVAPVVAFAISFVSKRFRKIS 193
           +V          +     + IG   LM      L+L+ I++ P + + +S    R  +  
Sbjct: 123 EVGEIAHHGPEDLFLAIMTFIGAFILMATVHLNLALLTIIIVPFMTYLVSRYGARMTETW 182

Query: 194 RNMQTAMGHVTSSAEQMLKGHKVVLSYGGQEVERKRFDKVSNSMRQQTMKLVSAQSIADP 253
           R +   +G+  +  E+ + G +VV ++  ++ E+K F   + + R+  ++     + +  
Sbjct: 183 RQLFGQVGNFNARIEESVGGIRVVKAFANEDHEKKLFSHDNENYRRTKLQAYRIMTASMT 242

Query: 254 VIQMIASLALFAVLFLASVDSIRAELTPGTFTVVFSAMFGLMRPLKALTSVTSEFQRGMA 313
           +  +   L    V+       I+ EL+ G F      +    RP+  +TSV   + +G+A
Sbjct: 243 LSYLSTRLIQLIVMLAGIWYVIQGELSYGGFIGFLLLIEVFFRPVAKITSVLESYPKGIA 302

Query: 314 ACQTLFGLMDLETERDNGK--YEAERVNGEVDVKDVTFTYQGKEKPALSHVSFSIPQGKT 371
             +    L+D   E  +    ++A  + G++    V+F Y   ++P L ++  SI  G+T
Sbjct: 303 GFKRFTQLIDTVPEIADAPDAHDAGPLKGDIRFNQVSFGYSA-DRPILRNIDLSIRAGET 361

Query: 372 VALVGRSGSGKSTIANLFTRFYDVDSGSICLDGHDVRDYKLTNLRRHFALVSQNVHLFND 431
           VA VG SG+GK+T+ +L  RFYD+ SG+I +DG D+R     +LR    +V Q+V LF  
Sbjct: 362 VAFVGPSGAGKTTLCSLLPRFYDLTSGAITIDGMDIRQMTQASLRSQIGIVQQDVFLFGG 421

Query: 432 TIANNIAYAAEGEYTREQIEQAARQAHAMEFIENMPQGLDTVIGENGTSLSGGQRQRVAI 491
           TI  NIAY  + + + ++I +AAR+A   E IEN+P GLDTV+GE G  LSGGQ+QR++I
Sbjct: 422 TIRENIAYG-KLDASDDEIMEAARRARLDELIENLPDGLDTVVGERGVKLSGGQKQRLSI 480

Query: 492 ARALLRDAPVLILDEATSALDTESERAIQAALDELQKNKTVLVIAHRLSTIEQADEILVV 551
           AR  L++ P+LILDEATSALDT +E+AIQ +L EL   +T L+IAHRL+TI+ A  I+VV
Sbjct: 481 ARIFLKNPPILILDEATSALDTATEQAIQQSLSELSAGRTTLIIAHRLATIQNAGRIVVV 540

Query: 552 DEGEIIERGRHADLLAQDGAYAQLHRIQFGE 582
           D G IIE+G H  LL Q G YA+LH+ QFG+
Sbjct: 541 DNGSIIEQGSHQVLLDQSGIYARLHQAQFGQ 571