Pairwise Alignments

Query, 582 a.a., lipid A export ATP-binding/permease MsbA from Vibrio cholerae E7946 ATCC 55056

Subject, 595 a.a., lipid A export permease/ATP-binding protein MsbA from Magnetospirillum magneticum AMB-1

 Score =  425 bits (1093), Expect = e-123
 Identities = 233/581 (40%), Positives = 351/581 (60%), Gaps = 7/581 (1%)

Query: 6   DESNWQTFKRLWTY-IRLYKAGLVVSTIALVINAAADTYMISLLKPLLDEGFGNAESNFL 64
           D S W   +RL+   +R Y   ++ +   +V+ AAA+     L+ P++++ F      FL
Sbjct: 9   DHSTWVLVRRLFNEGMRPYMGKVMAAVFCMVVGAAANAGYALLMDPVVNKIFTEKRPEFL 68

Query: 65  RILPFMILGLMFVRGLSGFASSYCLSWVSGNVVMQMRRRLFNHFMHMPVRFFDQESTGGL 124
             L   +LG   V+ +  +  +  LS V   V+  M+ RLF H M + V FF   STG +
Sbjct: 69  LPLALAVLGTFAVKSVCNYGEAVFLSKVGLRVIADMQSRLFAHLMRLDVAFFHANSTGRI 128

Query: 125 LSRITYDSEQVAGATSRALVSIVREGASIIGLLTLMFWNSWQLSLVLIVVAPVVAFAISF 184
           LSR+T D  Q+  A S AL    ++ +S+I L+  MF+  W+LS     + P+    I  
Sbjct: 129 LSRLTNDISQMRFAVSDALTGAGKDASSVIFLIGAMFYQDWRLSAWTFFIFPIAILPIRK 188

Query: 185 VSKRFRKISRNMQTAMGHVTSSAEQMLKGHKVVLSYGGQEVERKRFDKVSNSMRQQTMKL 244
           + +R RK++ N Q  MG +T+  EQ ++G +VV +YG +E E+++   +   ++    K 
Sbjct: 189 LGRRMRKVTANTQEHMGQLTTYLEQAVQGIRVVKAYGMEEYEKRKVGALVEMLQDLIYKA 248

Query: 245 VSAQSIADPVIQMIASLALFAVLFLASVDSIRAELTPGTFTVVFSAMFGLMRPLKALTSV 304
              +S + P+++++  +A+  V+       +  E TPG F    +A+    RP+K+L ++
Sbjct: 249 ARVRSASSPIMELLGGIAITVVILYGGTRVVNGETTPGAFFSFITALMLAYRPIKSLAAM 308

Query: 305 TSEFQRGMAACQTLFGLMDLET---ERDNGKYEAERVNGEVDVKDVTFTYQGKEKPALSH 361
            +  Q G+AA    F ++D +    E+D G  +   + G V  + V FTY G  K  L  
Sbjct: 309 NTNLQEGLAAASRTFSVLDTQPTIFEKD-GAADLVVLEGNVSFEGVFFTYDG-SKAVLDG 366

Query: 362 VSFSIPQGKTVALVGRSGSGKSTIANLFTRFYDVDSGSICLDGHDVRDYKLTNLRRHFAL 421
           +  ++P GKTVALVG SG+GKST+ NL  RFYDV  G + +DG DVR+  L++LR   AL
Sbjct: 367 IDLAVPGGKTVALVGPSGAGKSTVLNLLPRFYDVTDGHVLVDGQDVRNVSLSSLRSKIAL 426

Query: 422 VSQNVHLFNDTIANNIAYAAEGEYTREQIEQAARQAHAMEFIENMPQGLDTVIGENGTSL 481
           VSQ + LF+D+I  NIAY   G  T E+IE AAR A A +FI ++P+G DTV+GE G +L
Sbjct: 427 VSQEITLFDDSIRANIAYGRFGA-TDEEIEAAARSAAAHDFIVSLPEGYDTVVGERGLNL 485

Query: 482 SGGQRQRVAIARALLRDAPVLILDEATSALDTESERAIQAALDELQKNKTVLVIAHRLST 541
           SGGQRQR+AIARA+L++AP+L+LDEATSALDTESER +Q AL+ L + +T +VIAHRLST
Sbjct: 486 SGGQRQRLAIARAMLKNAPILLLDEATSALDTESERQVQTALELLMRGRTTIVIAHRLST 545

Query: 542 IEQADEILVVDEGEIIERGRHADLLAQDGAYAQLHRIQFGE 582
           +  AD I V+D+G +IE G H  L+A++G YA+L+ +QF E
Sbjct: 546 VVNADLIHVLDKGRVIESGDHNALMAKNGTYARLYAMQFAE 586