Pairwise Alignments

Query, 582 a.a., lipid A export ATP-binding/permease MsbA from Vibrio cholerae E7946 ATCC 55056

Subject, 582 a.a., fused lipid transporter subunits of ABC superfamily: membrane component/ATP-binding component (NCBI) from Escherichia coli BW25113

 Score =  787 bits (2033), Expect = 0.0
 Identities = 393/582 (67%), Positives = 482/582 (82%), Gaps = 2/582 (0%)

Query: 3   LHSDE--SNWQTFKRLWTYIRLYKAGLVVSTIALVINAAADTYMISLLKPLLDEGFGNAE 60
           +H+D+  S WQTF+RLW  I  +KAGL+V+ +AL++NAA+DT+M+SLLKPLLD+GFG  +
Sbjct: 1   MHNDKDLSTWQTFRRLWPTIAPFKAGLIVAGVALILNAASDTFMLSLLKPLLDDGFGKTD 60

Query: 61  SNFLRILPFMILGLMFVRGLSGFASSYCLSWVSGNVVMQMRRRLFNHFMHMPVRFFDQES 120
            + L  +P +++GLM +RG++ + SSYC+SWVSG VVM MRRRLF H M MPV FFD++S
Sbjct: 61  RSVLVWMPLVVIGLMILRGITSYVSSYCISWVSGKVVMTMRRRLFGHMMGMPVSFFDKQS 120

Query: 121 TGGLLSRITYDSEQVAGATSRALVSIVREGASIIGLLTLMFWNSWQLSLVLIVVAPVVAF 180
           TG LLSRITYDSEQVA ++S AL+++VREGASIIGL  +MF+ SWQLS++LIV+AP+V+ 
Sbjct: 121 TGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMMFYYSWQLSIILIVLAPIVSI 180

Query: 181 AISFVSKRFRKISRNMQTAMGHVTSSAEQMLKGHKVVLSYGGQEVERKRFDKVSNSMRQQ 240
           AI  VSKRFR IS+NMQ  MG VT+SAEQMLKGHK VL +GGQEVE KRFDKVSN MR Q
Sbjct: 181 AIRVVSKRFRNISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNRMRLQ 240

Query: 241 TMKLVSAQSIADPVIQMIASLALFAVLFLASVDSIRAELTPGTFTVVFSAMFGLMRPLKA 300
            MK+VSA SI+DP+IQ+IASLAL  VL+ AS  S+   LT GT TVVFS+M  LMRPLK+
Sbjct: 241 GMKMVSASSISDPIIQLIASLALAFVLYAASFPSVMDSLTAGTITVVFSSMIALMRPLKS 300

Query: 301 LTSVTSEFQRGMAACQTLFGLMDLETERDNGKYEAERVNGEVDVKDVTFTYQGKEKPALS 360
           LT+V ++FQRGMAACQTLF ++D E E+D GK   ER  G+V+ ++VTFTY G++ PAL 
Sbjct: 301 LTNVNAQFQRGMAACQTLFTILDSEQEKDEGKRVIERATGDVEFRNVTFTYPGRDVPALR 360

Query: 361 HVSFSIPQGKTVALVGRSGSGKSTIANLFTRFYDVDSGSICLDGHDVRDYKLTNLRRHFA 420
           +++  IP GKTVALVGRSGSGKSTIA+L TRFYD+D G I +DGHD+R+Y L +LR   A
Sbjct: 361 NINLKIPAGKTVALVGRSGSGKSTIASLITRFYDIDEGEILMDGHDLREYTLASLRNQVA 420

Query: 421 LVSQNVHLFNDTIANNIAYAAEGEYTREQIEQAARQAHAMEFIENMPQGLDTVIGENGTS 480
           LVSQNVHLFNDT+ANNIAYA   +Y+REQIE+AAR A+AM+FI  M  GLDTVIGENG  
Sbjct: 421 LVSQNVHLFNDTVANNIAYARTEQYSREQIEEAARMAYAMDFINKMDNGLDTVIGENGVL 480

Query: 481 LSGGQRQRVAIARALLRDAPVLILDEATSALDTESERAIQAALDELQKNKTVLVIAHRLS 540
           LSGGQRQR+AIARALLRD+P+LILDEATSALDTESERAIQAALDELQKN+T LVIAHRLS
Sbjct: 481 LSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLS 540

Query: 541 TIEQADEILVVDEGEIIERGRHADLLAQDGAYAQLHRIQFGE 582
           TIE+ADEI+VV++G I+ERG H DLL   G YAQLH++QFG+
Sbjct: 541 TIEKADEIVVVEDGVIVERGTHNDLLEHRGVYAQLHKMQFGQ 582