Pairwise Alignments

Query, 582 a.a., lipid A export ATP-binding/permease MsbA from Vibrio cholerae E7946 ATCC 55056

Subject, 608 a.a., ABC-type multidrug transport system, ATPase and permease components from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  320 bits (821), Expect = 8e-92
 Identities = 180/523 (34%), Positives = 311/523 (59%), Gaps = 13/523 (2%)

Query: 64  LRILPFMILGLMFVRGLSGFASSYCLSWVSGNVVMQMRRRLFNHFMHMPVRFFDQESTGG 123
           L+++  +I+  + +  L  + S   +  +  + ++ +R+++F++ M++ V +F  +  G 
Sbjct: 85  LQMVCAVIIASVILGNLFRYFSQLVMENLRIHTLLNLRKKVFDNVMNLHVGYFSNQRKGD 144

Query: 124 LLSRITYDSEQVAGATSRALVSIVREGASIIGLLTLMFWNSWQLSLVLIVVAPVVAFAIS 183
           ++S+I+ D + V  + +  L  I +E   ++  + ++F  S++L++  ++V PV AF I+
Sbjct: 145 IISKISSDVQVVQFSVTGTLQVIFKEPLQLLAYIFMLFAISYKLTIFSLLVIPVSAFVIA 204

Query: 184 FVSKRFRKISRNMQTAMGHVTSSAEQMLKGHKVVLSYGGQEVERKRFDKVSNSMRQQTMK 243
            + KR +  +   Q   G + S  ++ L G K++ ++   E+ + +F   +        K
Sbjct: 205 KIVKRLKAQASQAQHLYGVMISYLDEALSGIKIIKAFNATEMIKDKFHDENIKYSSLGKK 264

Query: 244 LVSAQSIADPV-----IQMIASLALFAVLFLASVDSIRAELTPGTFTVVFSAMFGLMRPL 298
           +   Q ++ PV     + M++ + L+    + +  S   EL+   F    +    +MRP 
Sbjct: 265 MAKRQQLSSPVSETLGVAMVSGIVLYGGSLIINNQS---ELSASDFIAYIALFSQVMRPA 321

Query: 299 KALTSVTSEFQRGMAACQTLFGLMDLETERDNGK--YEAERVNGEVDVKDVTFTYQGKEK 356
           KALT+  S    G+AA + +  L+D +    + K   E    N ++D++D++F+Y G+  
Sbjct: 322 KALTNAFSSIHSGLAAGERVLDLIDEKPAISDQKDAIEITAFNDKIDIQDLSFSYPGR-- 379

Query: 357 PALSHVSFSIPQGKTVALVGRSGSGKSTIANLFTRFYDVDSGSICLDGHDVRDYKLTNLR 416
           P L  ++ +IP+GK VALVG SG GKST+ +L  RF + DSG + +DG D+    + +LR
Sbjct: 380 PVLKDINLTIPKGKMVALVGPSGGGKSTMMDLIPRFIEPDSGQVLIDGTDIAHVTMDSLR 439

Query: 417 RHFALVSQNVHLFNDTIANNIAYAAEGEYTREQIEQAARQAHAMEFIENMPQGLDTVIGE 476
               +V+Q   LFNDTI NNIA+      T E++E AA+ A+A EFI     G  + +G+
Sbjct: 440 NMMGMVNQESILFNDTIFNNIAFGTPNA-TAEEVEAAAKIANAHEFIVQSENGYQSNMGD 498

Query: 477 NGTSLSGGQRQRVAIARALLRDAPVLILDEATSALDTESERAIQAALDELQKNKTVLVIA 536
            G  LSGGQ+QR+ IARA+L++ P+++LDEATSALDTESE+ +Q AL++L KN+T LVIA
Sbjct: 499 RGLKLSGGQKQRICIARAVLKNPPIMLLDEATSALDTESEKLVQDALNKLMKNRTSLVIA 558

Query: 537 HRLSTIEQADEILVVDEGEIIERGRHADLLAQDGAYAQLHRIQ 579
           HRLSTI+ AD I+V++EG IIE+G H +L+ Q+G Y++L  +Q
Sbjct: 559 HRLSTIQNADIIVVLEEGRIIEQGNHQELMTQEGLYSKLVNMQ 601