Pairwise Alignments

Query, 582 a.a., lipid A export ATP-binding/permease MsbA from Vibrio cholerae E7946 ATCC 55056

Subject, 611 a.a., ABC-type multidrug transport system, ATPase and permease components from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  318 bits (814), Expect = 5e-91
 Identities = 181/514 (35%), Positives = 295/514 (57%), Gaps = 6/514 (1%)

Query: 70  MILGLMFVRGLSGFASSYCLSWVSGNVVMQMRRRLFNHFMHMPVRFFDQESTGGLLSRIT 129
           +I+  +F+  L  + S   L+ V  +V+ +MR  +F+    M + +F  E  G L+SRIT
Sbjct: 98  IIVVSVFLSNLFTYLSGVLLAKVKADVIKKMRMHIFDQVSRMHIGYFTNERKGDLMSRIT 157

Query: 130 YDSEQVAGATSRALVSIVREGASIIGLLTLMFWNSWQLSLVLIVVAPVVAFAISFVSKRF 189
            D ++V  +  ++L  + +E  +I+     +F+ S +L+L  I++ P+    I  ++KR 
Sbjct: 158 NDVQEVENSVVQSLRVVFKEPVTIVLYFGALFFMSVKLTLFTILIIPISGAIIGGITKRL 217

Query: 190 RKISRNMQTAMGHVTSSAEQMLKGHKVVLSYGGQEVERKRFDKVSNSMRQQTMKLVSAQS 249
           +K +   Q ++G + +  ++ + G +VV ++        +FDK ++   +  + +     
Sbjct: 218 KKKAVQSQESLGRIVNILDETIGGMRVVKAFSATGYVYDKFDKETDEYSKINVSMAKRNE 277

Query: 250 IADPVIQMIASLALFAVLFLAS--VDSIRAELTPGTFTVVFSAMFGLMRPLKALTSVTSE 307
           +A P+ Q +    +  +L      V +  A+L+   F         ++ P K ++     
Sbjct: 278 LASPISQFLGVFVVAGILLYGGSLVLNNAADLSASEFLAYIILFTQVLNPAKEISRAMGA 337

Query: 308 FQRGMAACQTLFGLMDLETERDNGKYEA--ERVNGEVDVKDVTFTYQGKEKPALSHVSFS 365
            QRG+A+   +F ++D      + +     ++ +  +  + V F Y  +    L  + F+
Sbjct: 338 VQRGLASADRIFKVVDTAPAIQDPERPKVLQQFDQAITFQHVDFGYDAQHL-VLKDIQFT 396

Query: 366 IPQGKTVALVGRSGSGKSTIANLFTRFYDVDSGSICLDGHDVRDYKLTNLRRHFALVSQN 425
           + +GKT+ALVG SG GKSTIA+L  RFYD  SG + LDG D+R   + +LR+   +V+Q 
Sbjct: 397 LEKGKTIALVGPSGGGKSTIADLVPRFYDPTSGEVKLDGSDIRTLAIDDLRKLIGIVTQE 456

Query: 426 VHLFNDTIANNIAYAAEGEYTREQIEQAARQAHAMEFIENMPQGLDTVIGENGTSLSGGQ 485
             LFNDT+ NNIA+    + +   + +AA+ A+A EFI  +  G  T IGE G+ LSGGQ
Sbjct: 457 SILFNDTVFNNIAFGLT-DASETAVIEAAKIANAHEFIAQLEHGYQTNIGERGSKLSGGQ 515

Query: 486 RQRVAIARALLRDAPVLILDEATSALDTESERAIQAALDELQKNKTVLVIAHRLSTIEQA 545
           RQR++IARA+L++ P+LILDEATSALD+ESER +Q AL  L  N+T LVIAHRLSTI+ A
Sbjct: 516 RQRLSIARAVLKNPPILILDEATSALDSESERLVQEALTHLMSNRTTLVIAHRLSTIQHA 575

Query: 546 DEILVVDEGEIIERGRHADLLAQDGAYAQLHRIQ 579
           DEILVV  GEI+ERG H  L++Q+G Y +L  +Q
Sbjct: 576 DEILVVQNGEIVERGTHDALISQEGLYKKLSTMQ 609