Pairwise Alignments

Query, 582 a.a., lipid A export ATP-binding/permease MsbA from Vibrio cholerae E7946 ATCC 55056

Subject, 591 a.a., ABC-type multidrug transport system, ATPase and permease components from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  332 bits (852), Expect = 2e-95
 Identities = 184/573 (32%), Positives = 332/573 (57%), Gaps = 9/573 (1%)

Query: 11  QTFKRLWTYIRLYKAG---LVVSTIALVINAAADTYMISLLKPLLDEGFGNAESNFLRIL 67
           Q   +L+ ++R Y+     L+  T+AL   A A T  + + K + +      +   LRI+
Sbjct: 17  QVLGKLYQFVRPYRGRFFFLIFLTVALA--ALAPTKPLFIQKAIDEHVALGDQEGLLRII 74

Query: 68  PFMILGLMFVRGLSGFASSYCLSWVSGNVVMQMRRRLFNHFMHMPVRFFDQESTGGLLSR 127
            ++++GL+ ++ +  FA +Y   W+   ++  +R +L+ H + M ++FFD    G L++R
Sbjct: 75  -YLLVGLLILQAVVQFAHTYLSGWIGQVIIRDIRVKLYRHLLKMRLKFFDNTPIGRLVTR 133

Query: 128 ITYDSEQVAGATSRALVSIVREGASIIGLLTLMFWNSWQLSLVLIVVAPVVAFAISFVSK 187
              D E ++   S  L +I+ +   +  +L +MFW  W+L+LV +   P++  +     +
Sbjct: 134 NISDIESLSNVFSEGLAAIIGDLLQLFTILGVMFWVDWKLTLVSLSTLPLLIISTYIFKE 193

Query: 188 RFRKISRNMQTAMGHVTSSAEQMLKGHKVVLSYGGQEVERKRFDKVSNSMRQQTMKLVSA 247
           + +     ++ A+ ++ S  ++ + G  +V  +  ++ E K+FD ++   ++  +K V  
Sbjct: 194 KVKVAFNEVRNAVSNLNSFLQEHITGMNIVQVFNREDSEYKKFDAINTEHKKANVKSVLY 253

Query: 248 QSIADPVIQMIASLALFAVLFLASVDSIRAELTPGTFTVVFSAMFGLMRPLKALTSVTSE 307
            +I  PV ++I ++ +  V++  +      +L  G        +    RP++ L    + 
Sbjct: 254 YAIYYPVAEIIQAVGIGLVVWYGATGVFGLDLKVGVLISFIMYLQLFFRPIRMLADRFNT 313

Query: 308 FQRGMAACQTLFGLMDLETERDN-GKYEAERVNGEVDVKDVTFTYQGKEKPALSHVSFSI 366
            Q G+ +   +F L++ +    N G Y  E++ G + +++V F Y  +E   L  ++F++
Sbjct: 314 LQMGVVSSSRIFKLLESDEHIANEGNYSPEKLKGNIKLENVWFAYNDEEW-VLKDINFNV 372

Query: 367 PQGKTVALVGRSGSGKSTIANLFTRFYDVDSGSICLDGHDVRDYKLTNLRRHFALVSQNV 426
             G+TVALVG +G+GKS+I NL +RFY+++ GSI +D  ++RD++L  LR+H  +V Q+V
Sbjct: 373 KHGETVALVGATGAGKSSIINLISRFYEINKGSIKIDDQNIRDFELGTLRKHIGVVLQDV 432

Query: 427 HLFNDTIANNIAYAAEGEYTREQIEQAARQAHAMEFIENMPQGLDTVIGENGTSLSGGQR 486
            LF+DTI  NI      + TREQ+ +AA    A +FIE +P GLD  + E G +LS GQR
Sbjct: 433 FLFSDTIYFNITLG-NPDITREQVMEAAELVGAKKFIERLPGGLDYNVMERGATLSVGQR 491

Query: 487 QRVAIARALLRDAPVLILDEATSALDTESERAIQAALDELQKNKTVLVIAHRLSTIEQAD 546
           Q ++  RA++ +  ++ILDEATS++DTE+E  IQ A++++ K +T +VIAHRLSTI++A 
Sbjct: 492 QLISFVRAMVYNPEIIILDEATSSVDTETEELIQNAIEKMMKGRTSIVIAHRLSTIQKAH 551

Query: 547 EILVVDEGEIIERGRHADLLAQDGAYAQLHRIQ 579
            I+V+ +GEI E G H  LL ++G YAQLH++Q
Sbjct: 552 NIIVLHKGEIKEMGTHDTLLEKEGYYAQLHQMQ 584