Pairwise Alignments

Query, 582 a.a., lipid A export ATP-binding/permease MsbA from Vibrio cholerae E7946 ATCC 55056

Subject, 595 a.a., ABC-type multidrug transport system, ATPase and permease components from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  311 bits (798), Expect = 4e-89
 Identities = 184/572 (32%), Positives = 308/572 (53%), Gaps = 8/572 (1%)

Query: 16  LWTYIRLYKAGLVVSTIALVINAAADTYMISLLKPLLDEGFGNAES-NFLRILPFMILGL 74
           ++ ++  YK   +V  I L+ ++        +   L+D   G     + +  +  +++G+
Sbjct: 27  IFNFVLPYKGIFIVGLIFLLFSSLTLLAFPYVAGKLIDVAQGKKWMFSNINTIALVLIGI 86

Query: 75  MFVRGLSGFASSYCLSWVSGNVVMQMRRRLFNHFMHMPVRFFDQESTGGLLSRITYDSEQ 134
           +FV+ +  F   +  + VS   +  +R  L++  +++P+ FFD+  TG L+SRIT D   
Sbjct: 87  LFVQSVFSFFRVWLFALVSERSMRDIRLSLYSRLVNLPMSFFDKRRTGELISRITSDVSL 146

Query: 135 VAGATSRALVSIVREGASIIGLLTLMFWNSWQLSLVLIVVAPVVAFAISFVSKRFRKISR 194
           +    S  L  + R+  +++     +F  + +L+L ++   PV+        K  RK+S+
Sbjct: 147 LQDTFSVTLAELFRQIITLLAGTVFLFVTTPRLTLFMLATFPVLVIIAMVFGKFIRKLSK 206

Query: 195 NMQTAMGHVTSSAEQMLKGHKVVLSYGGQEVERKRFDKVSNSMRQQTMKLVSAQSIADPV 254
             Q  +       E+ L+    V S+ G+  E  R+ K  N + +  +K    +      
Sbjct: 207 ETQDELAAANVIVEETLQSISTVKSFAGEAYEAARYGKGLNKVVKVALKAAGFRGAFISF 266

Query: 255 IQMIASLALFAVLFLASVDSIRAELTPGTFT--VVFSAMFGLMRPLKALTSVTSEFQRGM 312
           I       + AV++  ++      ++ G     V+++   G    +  L  +  + Q+ +
Sbjct: 267 IIFALFGGIVAVMWYGAMMVSTGAMSIGDLVSFVLYTTFIG--GSIAGLGDIYGQVQKAI 324

Query: 313 AACQTLFGLMDLETERDNGKYEAERVNGEVDVKDVTFTYQGK-EKPALSHVSFSIPQGKT 371
            + + +  ++D   E     Y+   + G V   DV+F Y  + E   L H++ SI  G+ 
Sbjct: 325 GSSERVLEILDESPEESLADYQEVSIKGNVSFSDVSFNYPTRPEADVLKHINISIQSGEK 384

Query: 372 VALVGRSGSGKSTIANLFTRFYDVDSGSICLDGHDVRDYKLTNLRRHFALVSQNVHLFND 431
           +AL G SG+GKSTI  L  +FY ++ G I +D   ++++ L  LR +  +V Q V LF  
Sbjct: 385 IALAGHSGAGKSTIIQLLMKFYTINFGEITIDDKPIQNWNLKQLRSNIGIVPQEVLLFGG 444

Query: 432 TIANNIAYAAEGEYTREQIEQAARQAHAMEFIENMPQGLDTVIGENGTSLSGGQRQRVAI 491
           +I  NIAYA + E T ++I +AA++A+A +FI   P+GLDT++GE G  LSGGQRQR+AI
Sbjct: 445 SIRENIAYA-KPEATEQEIIEAAKKANAWQFIGKFPEGLDTLVGERGIKLSGGQRQRIAI 503

Query: 492 ARALLRDAPVLILDEATSALDTESERAIQAALDELQKNKTVLVIAHRLSTIEQADEILVV 551
           ARA+L++  +LILDEATS+LD ESE  +Q ALDEL KN+T +VIAHRL+TI + D I V+
Sbjct: 504 ARAILKNPSILILDEATSSLDAESEALVQEALDELMKNRTTIVIAHRLATIRKVDRIYVM 563

Query: 552 DEGEIIERGRHADLLAQDGA-YAQLHRIQFGE 582
            +GEI+E G H DL  Q G  YA L ++QF E
Sbjct: 564 KDGEIVEEGSHDDLAVQKGGFYANLVKLQFAE 595