Pairwise Alignments

Query, 582 a.a., lipid A export ATP-binding/permease MsbA from Vibrio cholerae E7946 ATCC 55056

Subject, 575 a.a., Lipid A export ATP-binding/permease protein MsbA from Acinetobacter radioresistens SK82

 Score =  413 bits (1061), Expect = e-119
 Identities = 210/576 (36%), Positives = 362/576 (62%), Gaps = 3/576 (0%)

Query: 7   ESNWQTFKRLWTYIRLYKAGLVVSTIALVINAAADTYMISLLKPLLDEGFGNAESNFLRI 66
           + +++ + RL +Y++ Y    ++  +   INA+ +  +  LL+ +++      + N L  
Sbjct: 2   KQDFKVYARLLSYLKPYWGAALLVLVGFGINASTEVSVAKLLEYIINAIQHQNQQN-LNW 60

Query: 67  LPFMILGLMFVRGLSGFASSYCLSWVSGNVVMQMRRRLFNHFMHMPVRFFDQESTGGLLS 126
            PF+++ L+F RGL  F   Y  + +S +++ Q+R+ +F   + +P +++   ++G + +
Sbjct: 61  FPFLVIILIFFRGLGLFIGGYYTAVISRSLIFQIRQEVFAKLLRLPAQYYLDNNSGQITA 120

Query: 127 RITYDSEQVAGATSRALVSIVREGASIIGLLTLMFWNSWQLSLVLIVVAPVVAFAISFVS 186
           +I Y+ EQ+  A+S +L ++V+ G   +GL+  + + +W+L++ +++ AP++   I   +
Sbjct: 121 KIMYNVEQLTAASSESLKTLVQYGFITLGLIGYLLYTNWRLTICILIFAPLIGLLIRKAA 180

Query: 187 KRFRKISRNMQTAMGHVTSSAEQMLKGHKVVLSYGGQEVERKRFDKVSNSMRQQTMKLVS 246
           KR RK+S  +Q  MG +    ++ + G+ VV  +GG+  E++RF   SN   ++ +K+V 
Sbjct: 181 KRMRKLSVQVQNTMGDINHVVQESVNGNAVVKGFGGETFEQERFYHHSNENLKRGLKMVI 240

Query: 247 AQSIADPVIQMIASLALFAVLFLASVDSIRAELTPGTFTVVFSAMFGLMRPLKALTSVTS 306
            Q +  P++Q+I ++A+  ++++A    +    + G F    +A   L +P+K+LT +  
Sbjct: 241 VQQMNSPIVQLIMAIAMSIIIWIALRPQVLGNTSAGEFVAYITAAGLLAKPIKSLTDINE 300

Query: 307 EFQRGMAACQTLFGLMDLETERDNGKYEAERVNGEVDVKDVTFTYQGKEKPALSHVSFSI 366
           + QRGMAA  ++F L+D+  E++ G  +   + G ++   V  TY    + A+   S ++
Sbjct: 301 KLQRGMAAAYSVFELLDMPEEKNTGDLKPV-LKGNIEFNQVNLTYSDGSQ-AIYDFSLNV 358

Query: 367 PQGKTVALVGRSGSGKSTIANLFTRFYDVDSGSICLDGHDVRDYKLTNLRRHFALVSQNV 426
             G+TVALVGRSG+GKS++ NL  RF ++ SG I LDG D++  +LT LR   A+V+Q V
Sbjct: 359 KAGETVALVGRSGAGKSSLVNLLVRFQEISSGKILLDGFDIQKIELTALRSQIAMVNQQV 418

Query: 427 HLFNDTIANNIAYAAEGEYTREQIEQAARQAHAMEFIENMPQGLDTVIGENGTSLSGGQR 486
            LFN ++ +NIAY      +  +I  AA+ A+A +FI ++PQG DT++G  G +LSGGQR
Sbjct: 419 VLFNRSVRDNIAYGQLQGASEAEIIAAAKAAYAHDFIMSLPQGYDTILGAQGLNLSGGQR 478

Query: 487 QRVAIARALLRDAPVLILDEATSALDTESERAIQAALDELQKNKTVLVIAHRLSTIEQAD 546
           QR+AIARA+L++AP+LILDEATSALD ESE  IQ A D+  + +T +VIAHRLSTIE AD
Sbjct: 479 QRIAIARAILKNAPILILDEATSALDNESEHFIQKAFDKAMQERTTIVIAHRLSTIENAD 538

Query: 547 EILVVDEGEIIERGRHADLLAQDGAYAQLHRIQFGE 582
            I+V+D+G I+E+G H +L+ + GAY QLH+  F E
Sbjct: 539 RIVVMDKGRIVEQGNHQELMQKHGAYYQLHQRNFEE 574