Pairwise Alignments

Query, 252 a.a., 3-deoxy-manno-octulosonate cytidylyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 261 a.a., 3-deoxy-manno-octulosonate cytidylyltransferase from Xanthobacter sp. DMC5

 Score =  175 bits (444), Expect = 7e-49
 Identities = 113/250 (45%), Positives = 143/250 (57%), Gaps = 17/250 (6%)

Query: 5   VVIPARYQSTRLPGKPLADIGGKPMIQWVYEQAMQAGADRVIIATDDERVEQAVQAFGGV 64
           V+IPAR  +TRLPGKPLAD+GG+PMI  V  +A+ AG  RV +ATD   +  AV A G  
Sbjct: 22  VLIPARMAATRLPGKPLADVGGRPMIVEVARRAVAAGIGRVAVATDAPEIAAAVTAAGLE 81

Query: 65  VCMTSPNHQSGTERLAEVVAKM-AIPADHIVVNVQGDEPLIPPAIIRQVADNLAACSAPM 123
             MT  +H SG++R+ E +  +  +    IVVNVQGD P I P  IR     L   SA +
Sbjct: 82  AVMTRSDHPSGSDRIFEALTTLDPVGEVEIVVNVQGDLPTILPNTIRTALIPLLETSADI 141

Query: 124 ATLAVEIEDEAEVFNPNAVKVITDKSG----YALYFSRATIPWDRDNFAKADKAIVQPLL 179
           ATLA EI    E  +PN VKV+          ALYF+RAT P+              PL 
Sbjct: 142 ATLAAEITLAEERTDPNVVKVVGSPLAPGLLRALYFTRATAPFGEG-----------PLY 190

Query: 180 RHIGIYAYRAGFINTYLDWQPSQLEKIECLEQLRVLWHGEKIHVAVALEAPPAGVDTPED 239
            HIG+YAYR   +  ++   PS LEK E LEQLR L  G +I VAV ++A P GVDTP  
Sbjct: 191 HHIGLYAYRRAALERFVSLPPSPLEKREKLEQLRALEAGMRIDVAV-VDAVPLGVDTPSH 249

Query: 240 LEVVRRIVAE 249
           LE  R ++A+
Sbjct: 250 LERARALLAQ 259