Pairwise Alignments

Query, 252 a.a., 3-deoxy-manno-octulosonate cytidylyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 254 a.a., 3-deoxy-manno-octulosonate cytidylyltransferase from Pseudomonas simiae WCS417

 Score =  292 bits (748), Expect = 4e-84
 Identities = 151/249 (60%), Positives = 185/249 (74%), Gaps = 3/249 (1%)

Query: 2   SFTVVIPARYQSTRLPGKPLADIGGKPMIQWVYEQAMQAGADRVIIATDDERVEQAVQAF 61
           +FTVVIP+RY STRLPGKPL  IG KPMIQ V+EQA ++ A+RV++ATDD R+ +A + F
Sbjct: 4   AFTVVIPSRYASTRLPGKPLQLIGDKPMIQRVWEQACKSSAERVVVATDDPRIIEACKGF 63

Query: 62  GGVVCMTSPNHQSGTERLAEVVAKMAIPADHIVVNVQGDEPLIPPAIIRQVADNLAA-CS 120
           G    +T  +H SGT+RLAEV  ++ +  D IVVNVQGDEPLIPP++I QVA NLAA   
Sbjct: 64  GAEAVLTREDHNSGTDRLAEVATQLGLAPDAIVVNVQGDEPLIPPSVIDQVAANLAAHGE 123

Query: 121 APMATLAVEIEDEAEVFNPNAVKVITDKSGYALYFSRATIPWDRDNFAKADKAIVQ--PL 178
           A MATLA  IED   +FNPN VKV++D +G AL FSR+ +PW RD FAK    + +  P 
Sbjct: 124 ARMATLAEPIEDIETLFNPNVVKVVSDINGLALTFSRSVLPWARDAFAKKPDVLPEGVPY 183

Query: 179 LRHIGIYAYRAGFINTYLDWQPSQLEKIECLEQLRVLWHGEKIHVAVALEAPPAGVDTPE 238
            RHIGIYAYRAGF++ ++ W P  LE  E LEQLR LWHG +IHV  ALEAPPAGVDTPE
Sbjct: 184 RRHIGIYAYRAGFLHDFVSWGPCWLENTESLEQLRALWHGVRIHVGDALEAPPAGVDTPE 243

Query: 239 DLEVVRRIV 247
           DLE VRR++
Sbjct: 244 DLERVRRLL 252