Pairwise Alignments

Query, 252 a.a., 3-deoxy-manno-octulosonate cytidylyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 266 a.a., 3-deoxy-manno-octulosonate cytidylyltransferase (EC 2.7.7.38) from Sphingobium sp. HT1-2

 Score =  100 bits (248), Expect = 4e-26
 Identities = 82/259 (31%), Positives = 123/259 (47%), Gaps = 18/259 (6%)

Query: 5   VVIPARYQSTRLPGKPLADIGGKPMIQWVYEQAMQAGADR----VIIATDDERVEQAVQA 60
           VVIPAR  S+RLP KPL  I G+ ++      A  A   R    +++ATDD+ +    QA
Sbjct: 1   VVIPARAGSSRLPRKPLRLIAGRSLLHRTIAMARAAIGARAGVALVVATDDDEIAAHAQA 60

Query: 61  FGGVVCMTSPNHQSGTERLAEVVAKMAIPADHIVVNVQGDEPLIPPAIIRQVADNLAACS 120
            G    MT     +G+ R        A   D IV N+QGD P  P   +  V + L A  
Sbjct: 61  AGCDAVMTDSAIATGSGRALAAARAQATQPDFIV-NLQGDSPFQPEGALGAVIEALDA-G 118

Query: 121 APMATLAVEIE-------DEAEVFNP-NAVKVITDKSGYALYFSRATIPWDRDNFAKADK 172
           A +AT  + ++        E +  +P +         G AL+FS+  IP  RD       
Sbjct: 119 AQVATPVIGLDWAALDALREHKQRSPFSGTTCARGADGRALWFSKTIIPAIRDEDRLRAA 178

Query: 173 AIVQPLLRHIGIYAYRAGFINTYLDWQPSQLEKIECLEQLRVLWHGEKIHVAVALEAP-- 230
             + P+ RH+G+Y Y    +  +    P+ LE +E LEQLR+L  G  I + V ++ P  
Sbjct: 179 GPISPVWRHVGLYGYAYDALARFEASPPTALENLEGLEQLRLLELGIDI-MTVPVDPPVF 237

Query: 231 -PAGVDTPEDLEVVRRIVA 248
             +G+DT  D++ V  ++A
Sbjct: 238 DSSGIDTEADIQRVEALIA 256