Pairwise Alignments

Query, 252 a.a., 3-deoxy-manno-octulosonate cytidylyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 251 a.a., 3-deoxy-manno-octulosonate cytidylyltransferase from Agrobacterium fabrum C58

 Score =  183 bits (465), Expect = 3e-51
 Identities = 114/251 (45%), Positives = 147/251 (58%), Gaps = 17/251 (6%)

Query: 5   VVIPARYQSTRLPGKPLADIGGKPMIQWVYEQAMQAGADRVIIATDDERVEQAVQAFGGV 64
           V+IPAR  STRLPGKPLADIGG+PMI  V  +A +AGA+R+++A DDE+V  AVQ  G  
Sbjct: 11  VLIPARMASTRLPGKPLADIGGRPMIVQVALRAREAGAERIVVAVDDEQVFAAVQNAGFD 70

Query: 65  VCMTSPNHQSGTERLAEVVAKM-AIPADHIVVNVQGDEPLIPPAIIRQVADNLAACSAPM 123
           V MT  +HQSG++R+ E + K         V+NVQGD P I    IR     +   +  +
Sbjct: 71  VMMTRGDHQSGSDRIFEALQKADPYGKAEYVINVQGDLPTIEAETIRASLRPMENAAVDI 130

Query: 124 ATLAVEIEDEAEVFNPNAVKVI----TDKSGYALYFSRATIPWDRDNFAKADKAIVQPLL 179
           ATL VEI DE E  NPN VKV+    ++    ALYF+R T P+              PL 
Sbjct: 131 ATLTVEITDEEEKTNPNVVKVVGSPLSETRLRALYFTRTTAPYGDG-----------PLY 179

Query: 180 RHIGIYAYRAGFINTYLDWQPSQLEKIECLEQLRVLWHGEKIHVAVALEAPPAGVDTPED 239
            HIG+Y YR   + T++   PS LE  E LEQLR L  G +I   + + + P GVDTP D
Sbjct: 180 HHIGLYTYRRAALETFVRLPPSPLELRERLEQLRALEAGMRIDAEI-VRSVPLGVDTPHD 238

Query: 240 LEVVRRIVAER 250
           LE  R+I+A R
Sbjct: 239 LEKARKILAGR 249