Pairwise Alignments

Query, 516 a.a., SpoVR family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 510 a.a., ycgB component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) from Escherichia coli BW25113

 Score =  815 bits (2105), Expect = 0.0
 Identities = 372/497 (74%), Positives = 450/497 (90%), Gaps = 2/497 (0%)

Query: 15  NSKRLPDGPDWTFELIERYHQEIRRVAELYRLDTYPNQIEIITSEQMMDAYSSIGMPINY 74
           ++ RL DGPDWTF+L++ Y  EI RVA+LYRLDTYP+QIE+ITSEQMMDAYSS+GMPINY
Sbjct: 10  DTTRLSDGPDWTFDLLDVYLAEIDRVAKLYRLDTYPHQIEVITSEQMMDAYSSVGMPINY 69

Query: 75  NHWSFGKKFIQTEQTYKHGQMGLAYEIVINSDPCIAYLMEENTVTMQALVMAHACYGHNS 134
            HWSFGKKFI+TE+ YKHGQ GLAYEIVINS+PCIAYLMEENT+TMQALVMAHACYGHNS
Sbjct: 70  PHWSFGKKFIETERLYKHGQQGLAYEIVINSNPCIAYLMEENTITMQALVMAHACYGHNS 129

Query: 135 FFKGNYLFQTWTDASSIIDYLLFAKNYIAECEQKFGVNEVEKLLDSCHALMNYGVDRYKR 194
           FFK NYLF++WTDASSI+DYL+FA+ YI ECE+++GV+EVE+LLDSCHALMNYGVDRYKR
Sbjct: 130 FFKNNYLFRSWTDASSIVDYLIFARKYITECEERYGVDEVERLLDSCHALMNYGVDRYKR 189

Query: 195 PEKISIAEEKARQEEREAYLQSQVNALWRTVPKKAVEQE--KQRRFPSEPQENILYFIEK 252
           P+KIS+ EEKARQ+ RE YLQSQVN LWRT+PK+  E+   + RR+PSEPQEN+LYF+EK
Sbjct: 190 PQKISLQEEKARQKSREEYLQSQVNMLWRTLPKREEEKTVAEARRYPSEPQENLLYFMEK 249

Query: 253 HAPLLEPWQREIVRIVRKVSQYFYPQKQTQVMNEGWATFWHYTILNHLYDEGLLSDKFML 312
           +APLLE WQREI+RIVRKVSQYFYPQKQTQVMNEGWATFWHYTILNHLYDEG ++++FML
Sbjct: 250 NAPLLESWQREILRIVRKVSQYFYPQKQTQVMNEGWATFWHYTILNHLYDEGKVTERFML 309

Query: 313 EFLHSHTSVVAQPPYNSRYFSGINPYALGFAMFRDIKRICEEPTEEDKEWFPELAGANWL 372
           EFLHSHT+VV QPPYNS ++SGINPYALGFAMF+DIKRIC+ PTEEDK WFP++AG++WL
Sbjct: 310 EFLHSHTNVVFQPPYNSPWYSGINPYALGFAMFQDIKRICQSPTEEDKYWFPDIAGSDWL 369

Query: 373 DALHFAMRNFKDESFISQYLSPKLIRDFKFFAICDDDRKNHIEISAIHDDLGYQQIREKL 432
           + LHFAMR+FKDESFISQ+LSPK++RDF+FF + DDDR N++EISAIH++ GY++IR +L
Sbjct: 370 ETLHFAMRDFKDESFISQFLSPKVMRDFRFFTVLDDDRHNYLEISAIHNEEGYREIRNRL 429

Query: 433 AAQYNLSNLEPNIQVYSVDVRGDRSLTLQYVPHDRIPLDPSYEEVLKHLHRLWGFEVKLE 492
           ++QYNLSNLEPNIQ+++VD+RGDRSLTL+Y+PH+R PLD   +EVLKH+HRLWGF+V LE
Sbjct: 430 SSQYNLSNLEPNIQIWNVDLRGDRSLTLRYIPHNRAPLDRGRKEVLKHVHRLWGFDVMLE 489

Query: 493 EVKDTGRREILATCPKK 509
           +  + G  E+L  CP +
Sbjct: 490 QQNEDGSIELLERCPPR 506