Pairwise Alignments

Query, 220 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 229 a.a., membrane protein from Pseudomonas fluorescens SBW25

 Score =  114 bits (286), Expect = 1e-30
 Identities = 62/187 (33%), Positives = 98/187 (52%)

Query: 28  WPKFRDDKSFQHLTYFVMLGLFLLWSAQASVKEGLSIHFLALTTLTMMYGWRSAFILTLP 87
           W +   D+  QHL +  +  LF+LW  +     G+S HF+ +T +T++  W  A +    
Sbjct: 32  WVELFADRRRQHLLFGTVFALFMLWLVRRDFDTGVSYHFIGMTAVTLLLDWPLAIVGGFA 91

Query: 88  VSATLALFGKISFAALPEYLLLSSLLPILISYSIFALSYHYLPRNIFVFIFVAGFFNAGV 147
               L   G+   AAL    LL  +LP+L++ +   L     PRN FV+IF +GFF A +
Sbjct: 92  AQLGLMALGRQDLAALGVNGLLLIVLPVLVTEACALLVERAQPRNPFVYIFCSGFFAAAL 151

Query: 148 TGSLHLLLNSLYIWQLGAYDWITITDNYLIFVPLLAFPEGLLNGMALAILAVFRPEWLRV 207
           +  L LLL    +W  G +      ++++ ++ L+ FPE  +NGM ++ L VF PEWL  
Sbjct: 152 SALLCLLLGLGLLWLDGRFAMPEWLEDFVGYLWLIIFPEAFINGMVISALVVFCPEWLET 211

Query: 208 FSDRDYL 214
           F+   YL
Sbjct: 212 FNRTRYL 218