Pairwise Alignments

Query, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 658 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  182 bits (462), Expect = 4e-50
 Identities = 121/352 (34%), Positives = 189/352 (53%), Gaps = 6/352 (1%)

Query: 277 VACVILAVLTVLLFMMVSFSLSKA----LTQIGRVLEKLSSGDLSQRLALISNKKDEFNQ 332
           +  VI +VL +LL +  +  L ++    L  + R  E L +GDLS RL + S+  DE  Q
Sbjct: 308 IRLVIGSVLAMLLAVGATVWLLRSKLAPLGDLVRQAEALGAGDLSVRLNVSSH--DEIGQ 365

Query: 333 LAFAVNKSCENLGGLVHVVQDRSVALSGDAVALNQAIDNLVRGQSDVMDQTQRLASATEE 392
           LA + N+  E L  +V  ++  +  ++  A AL+        G      +   +A A EE
Sbjct: 366 LARSFNQMGEALSTMVSHIRKAAEEVNSRAQALSGLSGGAYEGMEQQSGEITSMAGAVEE 425

Query: 393 VSLTTQQVSHSLEVVANVSKASTLAAAEGSKVISAAIGSLREVGSILQSAASHIQQLEQA 452
            S T+  ++ ++     +++ +      G   +  A  SL  + + L S A+ I  L Q 
Sbjct: 426 FSATSLNIADNMGSTERLAQENAQQTRIGRNSMQEASSSLEHIAAALNSTATVINTLGQR 485

Query: 453 SAKVDSVMDIINGIAEQTNLLALNAAIEAACAGEQGRGFAVVADEVRSLAVRTVNAVSEI 512
           S ++  ++ +I  IAEQTNLLALNAAIEAA AGEQGRGFAVVADEVR+LA RT  A  EI
Sbjct: 486 SQEIGGIVGVITSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLASRTREATDEI 545

Query: 513 SGTIETMKKESAEVILFMNQSEQTMEEGQSKGNQAMQALQRITQGTDEAASQTERIFSSI 572
           SG I+++++E+   I  M +    M+EG S+      AL RI + +  A  Q   I ++ 
Sbjct: 546 SGMIQSIQQETGNAISTMERGNVLMQEGLSRNADVASALARIDEQSRSAGQQFAAITTAT 605

Query: 573 KELSATSQAMAESMSQISSAMQALESYNTQLRVTSREVETRAESLEHDCRRF 624
           +E S+T+  ++ ++  I+ A        + L +T++E+ET A  L H+  RF
Sbjct: 606 QEQSSTATLLSSNLQSIALANSEQREVVSNLAITAKELETLAAGLRHEVDRF 657