Pairwise Alignments

Query, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 639 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  167 bits (424), Expect = 1e-45
 Identities = 155/631 (24%), Positives = 291/631 (46%), Gaps = 49/631 (7%)

Query: 2   DVTQLSQ---KQKITLFILVLCLGFIGLAVFTAQSLSKMNSQYQQSGDVTAGSAALFATQ 58
           D+TQL+    K +I     +L  G   +A     +L    +Q Q+  D       L    
Sbjct: 48  DITQLNASLTKLRIVRLQYMLANGDEAVAQNVQTNLDAFAAQQQKLIDSFKSPENLKLLN 107

Query: 59  AQLFELAAEREHLSSNKVSEIKTRLAQLMQKVEGDKRFLAENNFANEGNALQQAVQAFND 118
            Q   + A ++ L  NK+ E   R     ++V GDK  +A        NAL+ +V+   D
Sbjct: 108 EQKSIITAYQQSL--NKMREAY-RNGNASRQVMGDKADIANAQI----NALETSVKQMPD 160

Query: 119 DMQPWLEIKGELGFNVDDGKLA-ELKKLAVTIEKKIDETGMVTINSDFQAMIKAQQNYLL 177
             +   + +      V D K+  +L +  V        TG V+  ++ +A  + +     
Sbjct: 161 SSEHLAQFQA-----VADAKMQFQLARYEVR-----GYTGNVSPETEARAAAQIE----- 205

Query: 178 QPNEQNLRLFNRALAGFVSMSQSYAMLDLYKAEIEQFKTTFLRVSELSQQVKDIEKNLLS 237
                      +A+AG   ++ ++      ++ +   +T         Q  K    N+++
Sbjct: 206 -----------KAIAGLKDLNATFGASQ--QSALTALETALGAYRSAVQNYKAANANIVT 252

Query: 238 SEA--TAQGV-IESTAQRLEEVS-SRYQSLAEKAGEQTLLSILVACVILAVLTVLLFMMV 293
           + A  T QG  I + + +L E+  +R  + + +A    L+S L+A ++  +  +++   +
Sbjct: 253 ARAEMTTQGADIVTISDKLYEIQLTRRDAESAQARSLQLISTLLALLVGVIAALVITRQI 312

Query: 294 SFSLSKALTQIGRVLEKLSSGDLSQRLALISNKKDEFNQLAFAVNKSCENLGGLVHVVQD 353
           +  + + L     V+E+++SGDLS  + +   ++DE   L   + +    L  L+  ++D
Sbjct: 313 TRPIQETLA----VVERIASGDLSHNIQV--TRRDELGVLQQGIQRMGTTLRELISGIRD 366

Query: 354 RSVALSGDAVALNQAIDNLVRGQSDVMDQTQRLASATEEVSLTTQQVSHSLEVVANVSKA 413
               ++  A  L+   +    G +    +T ++A+A  E++ T Q+V+ + E  +  +  
Sbjct: 367 GVTQIASAAEELSAVTEQTSAGVNSQKIETDQVATAMHEMTATVQEVARNAEQASLAAAD 426

Query: 414 STLAAAEGSKVISAAIGSLREVGSILQSAASHIQQLEQASAKVDSVMDIINGIAEQTNLL 473
           +   A  G KV++ AI  +  + + +  +   +  L+Q S K+ SVMD+I  +AEQTNLL
Sbjct: 427 ADGQARAGDKVVAEAIAQIERLAAEVARSTDAMTHLQQESNKIGSVMDVIKAVAEQTNLL 486

Query: 474 ALNAAIEAACAGEQGRGFAVVADEVRSLAVRTVNAVSEISGTIETMKKESAEVILFMNQS 533
           ALNAAIEAA AGE GRGFAVVADEVR LA RT  +  EI G +  ++  + +V   MN S
Sbjct: 487 ALNAAIEAARAGEAGRGFAVVADEVRGLAQRTQKSTEEIEGLVAGLQNGTQQVANVMNNS 546

Query: 534 EQTMEEGQSKGNQAMQALQRITQGTDEAASQTERIFSSIKELSATSQAMAESMSQISSAM 593
               +       +A  +L+ IT+      S  ++I ++ ++ SA ++ ++ S+  +    
Sbjct: 547 RSLTDSSVELTRKAGVSLENITRTVSNIQSMNQQIAAAAEQQSAVAEEISRSIVNVRDVS 606

Query: 594 QALESYNTQLRVTSREVETRAESLEHDCRRF 624
           +   + + +   +S E+      L+     F
Sbjct: 607 EQTATASDETAKSSVELARLGSQLQQMVSHF 637