Pairwise Alignments

Query, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 623 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  155 bits (391), Expect = 6e-42
 Identities = 105/316 (33%), Positives = 173/316 (54%), Gaps = 18/316 (5%)

Query: 274 SILVACVILAVLTVLLFMMVSFSLSKALTQIGRVLEKLSSG--DLSQRLALISNKKDEFN 331
           S L+  VI  +L+++    +   L K L  + R +E ++SG  DL++RL   +N   EF 
Sbjct: 271 SSLIYTVIGVLLSIIGLSFLIKVLMKPLGALSRAIEDVASGQGDLTKRLD--TNTDMEFA 328

Query: 332 QLAFAVNKSCENLGGLVHVVQDRSVALSGDAVALNQAIDNLVRG-------QSDVMDQTQ 384
            LA   N  CE L       Q R   L G    +    +  V G        +  + + +
Sbjct: 329 ILAKDFNVFCETL-------QKRIQHLKGIGAEIMHGTEQTVLGAHESASAMAQQLQELE 381

Query: 385 RLASATEEVSLTTQQVSHSLEVVANVSKASTLAAAEGSKVISAAIGSLREVGSILQSAAS 444
           +LA+A  E+++T  +V+++ +  A  +  +  A+ +GSKV+S    S+  + + ++ A  
Sbjct: 382 QLATAMHEMAVTATEVANNAQGAAAAAHEADEASQDGSKVVSDTTRSIDALSARIEQAVE 441

Query: 445 HIQQLEQASAKVDSVMDIINGIAEQTNLLALNAAIEAACAGEQGRGFAVVADEVRSLAVR 504
            ++ LE A+  +++++ +IN IA+QTNLLALNAAIEAA AGE GRGFAVVADEVR+LA R
Sbjct: 442 EVKGLEVATGNIETILKVINDIADQTNLLALNAAIEAARAGESGRGFAVVADEVRTLAQR 501

Query: 505 TVNAVSEISGTIETMKKESAEVILFMNQSEQTMEEGQSKGNQAMQALQRITQGTDEAASQ 564
           T  + +EI   IE ++  ++ V   MN+S+ T ++   K   A ++LQRI       +  
Sbjct: 502 TQQSTTEIRNMIEQLQSGASAVSAAMNESKYTADDAVQKAQLANESLQRIRGAIQRISDM 561

Query: 565 TERIFSSIKELSATSQ 580
             +I S+ +E S  ++
Sbjct: 562 NMQIASAAEEQSLVAE 577