Pairwise Alignments

Query, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 672 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  168 bits (425), Expect = 8e-46
 Identities = 163/605 (26%), Positives = 285/605 (47%), Gaps = 64/605 (10%)

Query: 43  QSGDVTAGSAALFATQAQLFE-LAAEREHLSSN--KVSEIKTRLAQLMQKVEGDKRFLAE 99
           Q   +  G    FA   Q F+ + AE    S N  ++++  T L QL      + R+ +E
Sbjct: 82  QDTSLMDGMRQEFAQSKQRFQSVLAELSQASVNHPELAQPITELKQL------ETRYFSE 135

Query: 100 NNFANEGNALQQAVQA-FNDDMQPWLEIKGELGFN----VDDGKLAELKKLAVTIEKKID 154
            + A +      A QA      + +  +  EL       VDD     +K +A +   K+ 
Sbjct: 136 ADLAMDNYQAMFAAQASVQKSTREFQRLHSELSVGMKEFVDDNDSISVKVMAKSYFIKLK 195

Query: 155 ETGMVT---------------INSDFQAMIKAQQNY--LLQPNEQNLRLFNRALAGFVS- 196
           +  ++T               +N + +A+      Y  L     Q    F+  +A F   
Sbjct: 196 DAEVITSDALASSDVAFVEKAVNQNKKAVTHLNYAYRGLTTQMPQLKERFDEPVAKFTQD 255

Query: 197 MSQSYAMLDLYKAEIEQFKTTFLRVSELSQQVKDIEKNLLSSEATAQGVIESTAQRLEEV 256
           + Q   +LD +   ++     +  ++ L+ +V   +K +    A  Q   +   Q L E 
Sbjct: 256 IGQKGGVLDQHNEYLQARAALYNNIANLANEV---DKAMTILGAFNQTATDDLNQSLAEA 312

Query: 257 SSRYQSLAEKAGEQTLLSILVACVILAVLTVLLFMMVSFSLSKALTQIGRVLEKLSSGDL 316
            S YQ  A KA        +V  + + +L   +   ++ S+ + +T+I + LE L+ G++
Sbjct: 313 GSVYQQGAIKA--------VVIGIAVVLLATAIGYHIAHSVREPVTRILKTLESLTQGNM 364

Query: 317 SQRLALISNKKDEFNQLAFAVNKSCENLGGLVHVVQDRSVALSGDAVALNQAIDNLVRGQ 376
           +QR+ +  N  +EF++L+  +N   +NL  ++  +   S  L+  A + NQ      + +
Sbjct: 365 TQRIEIRYN--NEFSRLSRHINSLADNLHDILVKLNSASDDLTATA-STNQTTSLSAQNK 421

Query: 377 -SDVMDQTQRLASATEEVSLTTQQVSHSLEVVANVSKASTLAAAEGSKVISAAIGSLREV 435
            +   +QT  +A+A  E++ + Q+V++S +    + +    A+  G +++S  I ++R++
Sbjct: 422 LNSQREQTSSVAAAMTEMAHSVQEVANSAQNSLAMVQQVETASESGRQIMSTNISTIRQL 481

Query: 436 GSILQSAASHIQQLEQASAKVDSVMDIINGIAEQTNLLALNAAIEAACAGEQGRGFAVVA 495
            + L  +   +  L + S+++ S++D+I  IAEQTNLLALNAAIEAA AGEQGRGFAVVA
Sbjct: 482 ETRLIESVEAVGDLRKMSSQIGSILDVIRNIAEQTNLLALNAAIEAARAGEQGRGFAVVA 541

Query: 496 DEVRSLAVRTVNAVSEISGTIETMKKESAEVILFMNQSEQTME---EGQSKGNQAMQALQ 552
           DEVR LA RT  + SEI   I  ++  S+     +    Q ME   E  S  N AM+ +Q
Sbjct: 542 DEVRVLAQRTTQSTSEIESMISNLQSSSSLASKVIESCMQDMELSVEQASHANSAMEEIQ 601

Query: 553 -----------RITQGTDEAASQTERIFSSIKELSATSQAMAESMSQI---SSAMQALES 598
                       I+Q   E    T  I  SI++++  S    ++MSQI   S+ + AL +
Sbjct: 602 ALIIEISHMSTHISQAAGEQNETTTSIARSIEDINHISDESYQAMSQIAQTSANLTALAN 661

Query: 599 YNTQL 603
             ++L
Sbjct: 662 QQSEL 666