Pairwise Alignments

Query, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 674 a.a., hypothetical protein from Alteromonas macleodii MIT1002

 Score =  168 bits (426), Expect = 6e-46
 Identities = 130/411 (31%), Positives = 210/411 (51%), Gaps = 10/411 (2%)

Query: 219 LRVSELSQQVKDIEKNLLSSEAT-AQGVI--ESTAQRLEEVSSRYQSLAEKAGEQTLLSI 275
           L V  L ++  D EK L +S++  AQ V+  E+     ++ +S  +S    A       +
Sbjct: 267 LHVDRLERR-NDAEKALNASDSNIAQAVVALENLLNLADKKASHVESQVNGAIATGNTFV 325

Query: 276 LVACVILAVLTVLLFMMVSFSLSKALTQIGRVLEKLSSGDLSQRLALISNKKDEFNQLAF 335
           +V  +I   +   +  +   ++++ L ++  +L   SSGDL+ RL    + +DEF  LA 
Sbjct: 326 IVVVIISIAVAAFIGYVTVRAITRPLYRVNELLTVASSGDLTHRLD--DSAQDEFGLLAR 383

Query: 336 AVNKSCENLGGLVHVVQDRSVALSGDAVALNQAIDNLVRGQSDVMDQTQRLASATEEVSL 395
             N    NL  L+  +  R+  L+  +   +           D   Q  ++A+AT E+  
Sbjct: 384 NCNTLIGNLKELITAINVRAEQLAAASEQTSAVTAQTTHSIQDQKSQIGQVATATTEMHS 443

Query: 396 TTQQVSHSLE-VVANVSKASTLAAAEGSKVISAAIGSLREVGSI-LQSAASHIQQLEQAS 453
           T+Q V  + E  ++ +  A   A AE  + IS    +  E+ S  +Q AA  I +L Q S
Sbjct: 444 TSQLVVQNAEDTLSQIRHAD--AEAENVRQISLENKNTIEILSRDVQEAADVINKLHQDS 501

Query: 454 AKVDSVMDIINGIAEQTNLLALNAAIEAACAGEQGRGFAVVADEVRSLAVRTVNAVSEIS 513
           A +  ++D+I G+A+QTNLLALNAAIEAA AGEQGRGFAVVADEVR+LA RT  +  EI+
Sbjct: 502 ASIGGILDVIRGVADQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRTQESTQEIN 561

Query: 514 GTIETMKKESAEVILFMNQSEQTMEEGQSKGNQAMQALQRITQGTDEAASQTERIFSSIK 573
             IE ++  + + +  MNQ ++      ++  +A QAL  I+    +A   + +I  S +
Sbjct: 562 AMIEVLQAGAEKAVSVMNQGKEQTAACVAQTEKATQALDIISDAVHKAHDVSSQIEQSAR 621

Query: 574 ELSATSQAMAESMSQISSAMQALESYNTQLRVTSREVETRAESLEHDCRRF 624
           E +  SQ ++E +  I    +   +   Q   +S EV   AE L+   R+F
Sbjct: 622 EQNTVSQEISEKLETIVGIAEETTAGAQQTSESSHEVARLAEELQQSIRQF 672