Pairwise Alignments

Query, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 539 a.a., Methyl-accepting chemotaxis protein 4 from Alteromonas macleodii MIT1002

 Score =  165 bits (418), Expect = 4e-45
 Identities = 117/412 (28%), Positives = 201/412 (48%), Gaps = 17/412 (4%)

Query: 218 FLRVSELSQQVKDIEKNLLSSEATAQGVIESTAQRLEEVSSRYQSLAEKAGEQTLLSILV 277
           F R+ ELS Q+            +  G I + +Q  +   + ++   +         I  
Sbjct: 138 FSRLGELSAQMNQ----------SYDGAIAAMSQFRDAQQAAFEEAFKNTDSANTSLIST 187

Query: 278 ACVILAVLTVLLF---MMVSFSLSKALTQIGRVLEKLS--SGDLSQRLALISNKKDEFNQ 332
             ++  V+T+LLF   + +   + +++  + R L+ ++  +GDL+ R+   +  +DE  +
Sbjct: 188 GVILAVVVTILLFGTAVPIVRGIKQSIDDVVRSLKDIAQENGDLTVRIE--TKSEDEIGE 245

Query: 333 LAFAVNKSCENLGGLVHVVQDRSVALSGDAVALNQAIDNLVRGQSDVMDQTQRLASATEE 392
           L +  N+  + L G+V  V + S+ LS  A  L    +   R              A + 
Sbjct: 246 LVYWFNQFMDKLQGVVRDVVEASLPLSNLAQNLRGVTEETQRTIDVQQKSATNAKRAVDT 305

Query: 393 VSLTTQQVSHSLEVVANVSKASTLAAAEGSKVISAAIGSLREVGSILQSAASHIQQLEQA 452
           +S +   V+HS    A+ +  +T AA EG +++   + S++++   ++  A  I +LE  
Sbjct: 306 MSGSVDGVAHSAAQAASDANEATTAAREGRQIVQQTVTSIQQLAENVRETADVIARLESD 365

Query: 453 SAKVDSVMDIINGIAEQTNLLALNAAIEAACAGEQGRGFAVVADEVRSLAVRTVNAVSEI 512
           S KV SV+D+I GIAEQTNLLALNAAIEAA AGEQGRGFAVVADEVR+LA RT  +  EI
Sbjct: 366 SNKVGSVLDVIKGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRTQQSTEEI 425

Query: 513 SGTIETMKKESAEVILFMNQSEQTMEEGQSKGNQAMQALQRITQGTDEAASQTERIFSSI 572
             TIE ++  +   +  M++  +         N+A  +L+ IT          E+I  + 
Sbjct: 426 QSTIEQLQNAAHSAVEVMSRGTEQATSSVETANKAGSSLETITSTIGRINQMNEQIAHNT 485

Query: 573 KELSATSQAMAESMSQISSAMQALESYNTQLRVTSREVETRAESLEHDCRRF 624
           ++    +  +   + +I    +   S + +L     E+   A+ LE   ++F
Sbjct: 486 EDQRTVAVDIVRHVDEIHERTEQTASRSGELGSMCNELADLAQHLESIAKQF 537