Pairwise Alignments

Query, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 636 a.a., hypothetical protein from Alteromonas macleodii MIT1002

 Score =  144 bits (364), Expect = 9e-39
 Identities = 98/354 (27%), Positives = 177/354 (50%), Gaps = 4/354 (1%)

Query: 275 ILVACVILAVLTVLLFMMVSFSLSKALTQIGRVLEKLS--SGDLSQRLALISNKKDEFNQ 332
           I++  +++A    L+ + ++ +L+K L  +  V ++L    GDL  R+ +   K  E  +
Sbjct: 285 IIIWALVIAGAFALIGIWLAGTLTKPLESLADVFQQLGRGQGDLRSRIPMPEQK--EIAR 342

Query: 333 LAFAVNKSCENLGGLVHVVQDRSVALSGDAVALNQAIDNLVRGQSDVMDQTQRLASATEE 392
           L    N   ++L G +  V   S AL   A  + +             DQT + A+A  E
Sbjct: 343 LVEGFNNFIDHLHGTISQVAKTSHALKASAQDVAKQSHQTENSTKSQRDQTLQAAAALTE 402

Query: 393 VSLTTQQVSHSLEVVANVSKASTLAAAEGSKVISAAIGSLREVGSILQSAASHIQQLEQA 452
           +  T  +V+ S    A  +  +T  +A G ++   A+ ++  +   +Q  +  IQ L++ 
Sbjct: 403 MGSTVNEVAQSATHAAQNANMATTNSAHGREITQRAVHAINGLSGQIQDVSRVIQSLDEH 462

Query: 453 SAKVDSVMDIINGIAEQTNLLALNAAIEAACAGEQGRGFAVVADEVRSLAVRTVNAVSEI 512
           +A +  ++D I GI+EQTNLLALNAAIEAA AG+ GRGF+VVADEVR+LA R   A  EI
Sbjct: 463 TAAIGGILDTIRGISEQTNLLALNAAIEAARAGDHGRGFSVVADEVRTLAQRAAQATDEI 522

Query: 513 SGTIETMKKESAEVILFMNQSEQTMEEGQSKGNQAMQALQRITQGTDEAASQTERIFSSI 572
              I+  +++S   +  M  S     +  +  N+  + LQ I +          ++ ++ 
Sbjct: 523 QVKIDKFQQDSKSAVSQMESSRARTTDVVTATNEIDKLLQDIAEEIAHINDVNTQVATAT 582

Query: 573 KELSATSQAMAESMSQISSAMQALESYNTQLRVTSREVETRAESLEHDCRRFTL 626
           +E +   + ++ +++ IS++ +   +    L   S +++  A+ L  +  RF L
Sbjct: 583 EEQATVVEDISRNINDISASSEETLNATKILVSVSDKLDELAQELSSEVSRFKL 636