Pairwise Alignments

Query, 342 a.a., DUF2219 domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 319 a.a., putative outer membrane protein from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 51.2 bits (121), Expect = 3e-11
 Identities = 75/329 (22%), Positives = 128/329 (38%), Gaps = 65/329 (19%)

Query: 33  AQTSTFSLSIDND--GVFGVDQN------------YTNGLFLSYTSGAITPYWLAKPLSL 78
           A  S+ ++S+ ND  G+F    N            YT GLFL Y+        L+     
Sbjct: 21  ANASSLAISVANDDAGIFQPSLNALYGHPAADRGDYTAGLFLGYSHDLTDASQLS----- 75

Query: 79  SIWGAPSLDKWEFTLGHKMWTPSDIELTKPQP--NERPYAGYLHTEFNYLSLHPQQAQ-R 135
                       F +   +++PS     KP+    +R ++ +LHT   + SL     + R
Sbjct: 76  ------------FHIAQDIYSPSGANKRKPEAVKGDRAFSAFLHTGLEWNSLATNWLRYR 123

Query: 136 FNLTLGMTGESALSEEAQKLVHSITKSDEPNGWAYQVEDQLVGSLGYRSHFNWGRYHALA 195
               +G+ G  A  +E Q   H I  +++   W    +DQ+    GY +        A+ 
Sbjct: 124 LGTDIGVIGPDAGGQEVQNRAHRIIGAEKYPAW----QDQIENRYGYTAKGMVSLTPAID 179

Query: 196 GTELELANISEVNI--GNFRSDLSSGLMLRWGTD----LENNFGAAQISVENPFTPGMIG 249
              + +    EV+   GN    L  G  +  G D     +N FG            G+I 
Sbjct: 180 ILGVNVGFYPEVSAVGGNLFQYLGYGATVALGNDKTFNSDNGFGLLS-------RRGLIH 232

Query: 250 ASNQG--WFVFTGIEGRYRFNDVTIEGDRPLNGLDQPAEYYQVH--IEPWQATAVVGFAM 305
              +G  + VF G+E R    + T++G      L    E   ++  ++ ++  A +G++ 
Sbjct: 233 TQKEGLIYKVFAGVERREVDKNYTLQG----KTLQTKMETVDINKTVDEYRVGATIGYSP 288

Query: 306 YARSFGASLTFTANTPEFK--EDKESISG 332
            A     SL+    T EF+  +D   I+G
Sbjct: 289 VA----FSLSLNKVTSEFRTGDDYSYING 313