Pairwise Alignments

Query, 256 a.a., histidine/lysine/arginine/ornithine ABC transporter ATP-binding protein HisP from Vibrio cholerae E7946 ATCC 55056

Subject, 256 a.a., ABC transporter, ATP-binding protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

 Score =  266 bits (679), Expect = 4e-76
 Identities = 141/248 (56%), Positives = 173/248 (69%), Gaps = 3/248 (1%)

Query: 5   PALEIKNLHKTFGQNEVLKGISLQAQKGDVISIIGSSGSGKSTFLRCINLLETPTAGEIW 64
           P +EI+NL K FGQN VLK ISLQ  +G V++IIG SGSGKST LRCINLL  P AG + 
Sbjct: 4   PLIEIRNLKKAFGQNVVLKDISLQVGRGQVVAIIGPSGSGKSTLLRCINLLSVPNAGRVT 63

Query: 65  VKGELIQMKTTRQGTVQPAKEKQVQRIRSRLAMVFQSFNLWSHMTVLENVIEAPVHVLGV 124
           V  + I+       T  P  E+ + R R+   MVFQ FNL+ HMTVL NV+E PV VL  
Sbjct: 64  VGEQTIEFNGVH--TTLP-NERALARFRASTGMVFQHFNLFPHMTVLRNVMEGPVTVLKT 120

Query: 125 PKAQAIEQAERLLRKVGLYERKDYYPGHLSGGQQQRAAIARALAVEPEVMLFDEPTSALD 184
           PK QA  +A  LL KVGL ER DY+P  LSGGQ+QR AIARALA++P VMLFDE TSALD
Sbjct: 121 PKPQAEAEARALLAKVGLLERADYFPDKLSGGQKQRVAIARALAMKPAVMLFDEATSALD 180

Query: 185 PELVGEVLGVMRDLAEEGRTMLVVTHEMAFARDVSNHVMFLHQGKVEEQGKPEKLFKNPD 244
           PELVGEVLGV++ LA +G TM++VTHE+ FAR+V++ V+F+  G V E G PE +  NP 
Sbjct: 181 PELVGEVLGVIKGLARDGMTMILVTHEIGFAREVADQVIFMRDGVVAESGPPEAVIDNPT 240

Query: 245 SERLKQFI 252
               + F+
Sbjct: 241 QAATQAFL 248