Pairwise Alignments

Query, 260 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 261 a.a., ABC transporter for L-Arginine, substrate-binding component (from data) from Pseudomonas simiae WCS417

 Score =  240 bits (613), Expect = 2e-68
 Identities = 120/258 (46%), Positives = 173/258 (67%), Gaps = 2/258 (0%)

Query: 3   MKKWLVATALIATTISGVTQAKEWKTVRFGIEGAYPPFSWTEADGSLKGFDVDMANALCA 62
           MKK LV    +A ++  +    E K ++ GIE AYPPF+    DGS+ GFD D+ NALC 
Sbjct: 1   MKK-LVLLGALALSVLSMQAFAEGKPLKIGIEAAYPPFASKAPDGSIVGFDYDIGNALCE 59

Query: 63  EMQVECKIVPQDWDGIIPSLLARKYDAIIAAMSITEERKKKVDFTGKYAQIPNKFIAKKG 122
           EM+V+C  V Q++DG+IP+L  RK DAI+++MSIT++RKK VDFT +Y   P + + K+G
Sbjct: 60  EMKVKCTWVEQEFDGLIPALKVRKIDAILSSMSITDDRKKSVDFTNRYYLTPARLVLKEG 119

Query: 123 ADLAFTKEGLKGVKIGVQRATTHDKYITDNYGDT-VDIVRYGSFDEAYLDLANGRIAAVL 181
             ++ + + LKG KIGVQR + HD++  +        IV Y S +E YLD+  GR+   +
Sbjct: 120 TAVSDSLDELKGKKIGVQRGSIHDRFAKEVLAPKGATIVPYSSQNEIYLDVEAGRLDGTV 179

Query: 182 GDASALEEGMLNKPGGDAYEFVGPSLTDPKWFGEGMGIAVRKQDKELTEKLDAAITALRE 241
            DA+ L+EG L+ P G  Y F GP+ TD K+FG+G+GIAVRK DKE  ++++AAI A+R 
Sbjct: 180 ADATLLQEGFLDTPAGKGYAFTGPAFTDAKYFGDGIGIAVRKGDKENLDRINAAIAAIRA 239

Query: 242 KGIYQQIQAKYFKYDVYG 259
            G Y++I+ KYF +D+YG
Sbjct: 240 NGKYKEIEKKYFNFDIYG 257