Pairwise Alignments

Query, 260 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 258 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  174 bits (442), Expect = 1e-48
 Identities = 94/252 (37%), Positives = 145/252 (57%), Gaps = 4/252 (1%)

Query: 11  ALIATTISGVTQAKEWKTVRFGIEGAYPPFSWTEADGSLKGFDVDMANALCAEMQVECKI 70
           A +   +     A+EWK +RFG+   YPPF    ADGSL+GFD+++ NA+CA+++V+C  
Sbjct: 9   AALLLPLCATAHAQEWKEIRFGVFPEYPPFESVAADGSLQGFDIELGNAICAKLEVKCTW 68

Query: 71  VPQDWDGIIPSLLARKYDAIIAAMSITEERKKKVDFTGKYAQIPNKFIAKKGADLAFTKE 130
           V  ++DG+IP+L ARK+DAI+++M++T  R+K +DF+ +    P   I +K AD   T E
Sbjct: 69  VHNEFDGMIPALRARKFDAIMSSMAVTPAREKIIDFSDRLFLSPTSVITRKSADFGDTPE 128

Query: 131 GLKGVKIGVQRATTHDKYITDNYGDT-VDIVRYGSFDEAYLDLANGRIAAVLGDASALEE 189
            L G ++GV + +  + Y   +       I  Y S D+ Y DL NGR+ A L D    + 
Sbjct: 129 SLMGKQVGVLQGSLQEAYARAHLAKLGAQIKAYQSQDQNYADLQNGRLDATLTDKLEAQL 188

Query: 190 GMLNKPGGDAYEFVGPSLTDPKWFGEGMGIAVRKQDKELTEKLDAAITALREKGIYQQIQ 249
             L+KP G  ++  GP+  DP      + + +RK D+ L   ++  I A++  G Y QIQ
Sbjct: 189 NFLSKPEGSDFK-TGPAFKDPT-LPLDIAMGLRKNDQALRALINKGIAAVQADGTYAQIQ 246

Query: 250 AKYF-KYDVYGE 260
            KYF   D+Y E
Sbjct: 247 KKYFGDQDIYHE 258