Pairwise Alignments

Query, 260 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 258 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  220 bits (560), Expect = 3e-62
 Identities = 117/259 (45%), Positives = 163/259 (62%), Gaps = 2/259 (0%)

Query: 3   MKKWLVATALIATTISGVTQAKEWKTVRFGIEGAYPPFSWTEADGSLKGFDVDMANALCA 62
           MKK  + T L    ++        KT+R GIE AYPPF+    +G + GFD D+ NALCA
Sbjct: 1   MKKRSLITVLALGLLASSHAMAAEKTLRIGIEAAYPPFASKTEEGKIVGFDYDIGNALCA 60

Query: 63  EMQVECKIVPQDWDGIIPSLLARKYDAIIAAMSITEERKKKVDFTGKYAQIPNKFIAKKG 122
           +M+V+C  V  ++DG+IPSL  +K D  +++M+I E+RKK VDFT KY    ++ + K+G
Sbjct: 61  QMKVKCVWVEGEFDGLIPSLKVKKIDMALSSMTINEDRKKSVDFTHKYYFTSSRLVMKEG 120

Query: 123 ADLAFTKEGLKGVKIGVQRATTHDKYITDNYGDT-VDIVRYGSFDEAYLDLANGRIAAVL 181
           A +      LKG  IGVQRATT D+Y T+ +    +++ RY + +E Y+DLA GR+ A+ 
Sbjct: 121 AVVDDQYASLKGKTIGVQRATTTDRYATEVFEPKGINVKRYSNNEEIYMDLAAGRLDAIF 180

Query: 182 GDASALEEGMLNKPGGDAYEFVGPSLTDPKWFGEGMGIAVRKQDKELTEKLDAAITALRE 241
            D   L +  L  P G  Y FVGP L DPK+ GEG GIAVRK + EL  +L+AAI  +R 
Sbjct: 181 ADTIPLND-FLQMPRGKGYAFVGPELKDPKYVGEGAGIAVRKGNTELVGQLNAAIDGIRA 239

Query: 242 KGIYQQIQAKYFKYDVYGE 260
            G YQ+I  +YFK D+YG+
Sbjct: 240 SGEYQKISQQYFKSDIYGD 258