Pairwise Alignments

Query, 260 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 243 a.a., arginine ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  169 bits (429), Expect = 4e-47
 Identities = 94/253 (37%), Positives = 151/253 (59%), Gaps = 14/253 (5%)

Query: 3   MKKWLVATALIATTISGVTQAKEWKTVRFGIEGAYPPFSWTEADGSLKGFDVDMANALCA 62
           MKK L+A+ +   + S   Q +    ++F +E  Y PF + + +  ++GFDVD+ANALC 
Sbjct: 1   MKKILLASLIGLVSASAAAQQE----IKFVMEATYAPFEYMDENNQIQGFDVDLANALCK 56

Query: 63  EMQVECKIVPQDWDGIIPSLLARKYDAIIAAMSITEERKKKVDFTGKYAQIPNKFI--AK 120
           +++ +C    Q +D +IP+L  ++YDA I+AM ITE R ++V+F+  Y      F+  A 
Sbjct: 57  QLEAKCSFHNQAFDSLIPALKFKRYDAAISAMDITEARLEQVNFSNPYYDNSAAFVSLAG 116

Query: 121 KGADLAFTKEGLKGVKIGVQRATTHDKYITDNYGDTVDIVRYGSFDEAYLDLANGRIAAV 180
           K AD A     LKG ++GVQ  +TH  ++ +   D V  V Y S+ +A++D+ NGRI +V
Sbjct: 117 KVADQA----ALKGKRVGVQNGSTHQSFLLEQLSDVV-AVPYSSYQDAFIDMKNGRIDSV 171

Query: 181 LGDASALEEGMLNKPGGDAYEFVGPSLTDPKWFGEGMGIAVRKQDKELTEKLDAAITALR 240
            GD + + E      G +   +VG  +T+ ++FG G GIAV K ++ L ++L+AA+ A++
Sbjct: 172 FGDTAVVAEWF---KGDNNLAYVGERVTNAQYFGNGFGIAVNKDNQALLDQLNAALEAVK 228

Query: 241 EKGIYQQIQAKYF 253
           E G Y  I  KYF
Sbjct: 229 ENGEYAAIFNKYF 241