Pairwise Alignments

Query, 260 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 243 a.a., Arginine ABC transporter, periplasmic arginine-binding protein ArtJ from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  186 bits (473), Expect = 3e-52
 Identities = 107/252 (42%), Positives = 149/252 (59%), Gaps = 12/252 (4%)

Query: 3   MKKWLVATALIATTISGVTQAKEWKTVRFGIEGAYPPFSWTEADGSLKGFDVDMANALCA 62
           MKK LV  AL+A+  +G   A++   + FG+   YPPF   +A   + GFD+D+A ALC 
Sbjct: 1   MKK-LVLAALLASFATGSIAAEK---INFGVSATYPPFESLDASNKIVGFDIDLATALCK 56

Query: 63  EMQVECKIVPQDWDGIIPSLLARKYDAIIAAMSITEERKKKVDFTGKYAQIPNKFIAKKG 122
           +MQ EC      +D +IP+L  RKYDA+I+ M IT ER K+V F+  Y       IAKK 
Sbjct: 57  QMQAECTFTNHAFDSLIPALKFRKYDAVISGMDITPERSKQVAFSNPYYANSALVIAKKD 116

Query: 123 ADLAFTKEGLKGVKIGVQRATTHDKYITDNYGDTVDIVRYGSFDEAYLDLANGRIAAVLG 182
               FT   LKG +IG++  TTH KY+ D + + V  V Y S+  A +DL NGRI  V G
Sbjct: 117 TYKTFT--DLKGKRIGMENGTTHQKYLQDKHPE-VKTVAYDSYQNAIIDLKNGRIDGVFG 173

Query: 183 DASALEEGMLNKPG-GDAYEFVGPSLTDPKWFGEGMGIAVRKQDKELTEKLDAAITALRE 241
           D + + E +   P  G A E     +TDP++FG G+GIAVR  +K L EKL+ A+ A++ 
Sbjct: 174 DTAVVNEWLKTNPQLGPATE----KVTDPQYFGTGLGIAVRPDNKALLEKLNNALAAIKA 229

Query: 242 KGIYQQIQAKYF 253
            G YQ+I  ++F
Sbjct: 230 DGTYQKISDQWF 241