Pairwise Alignments

Query, 260 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 260 a.a., Histidine ABC transporter, histidine-binding periplasmic protein precursor HisJ (TC 3.A.1.3.1) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  183 bits (465), Expect = 3e-51
 Identities = 97/259 (37%), Positives = 147/259 (56%), Gaps = 2/259 (0%)

Query: 3   MKKWLVATALIATTISGVTQ-AKEWKTVRFGIEGAYPPFSWTEADGSLKGFDVDMANALC 61
           MKK  ++ +L+    S     A   + +R G +  Y PF    A G L GFD+D+A  LC
Sbjct: 1   MKKLALSLSLVLAFSSATAAFAAIPQKIRIGTDPTYAPFESKNAQGELVGFDIDLAKELC 60

Query: 62  AEMQVECKIVPQDWDGIIPSLLARKYDAIIAAMSITEERKKKVDFTGKYAQIPNKFIAKK 121
             +  +C  V    D +IPSL A+K DAI++++SITE+R++++ FT K     ++ +  K
Sbjct: 61  KRINTQCTFVENPLDALIPSLKAKKIDAIMSSLSITEKRQQEIAFTDKLYAADSRLVVAK 120

Query: 122 GADLAFTKEGLKGVKIGVQRATTHDKYITDNYGDT-VDIVRYGSFDEAYLDLANGRIAAV 180
            +D+  T   LKG ++GV + TT + +  +++    ++IV Y   D  Y DL  GRI A 
Sbjct: 121 NSDIQPTVASLKGKRVGVLQGTTQETFGNEHWAPKGIEIVSYQGQDNIYSDLTAGRIDAA 180

Query: 181 LGDASALEEGMLNKPGGDAYEFVGPSLTDPKWFGEGMGIAVRKQDKELTEKLDAAITALR 240
             D  A  EG L +P G  Y+F GP++ D K FG G G+ +RK+D EL E L+ A   +R
Sbjct: 181 FQDEVAASEGFLKQPVGKDYKFGGPAVKDEKLFGVGTGMGLRKEDNELREALNKAFAEMR 240

Query: 241 EKGIYQQIQAKYFKYDVYG 259
             G Y+++  KYF +DVYG
Sbjct: 241 ADGTYEKLAKKYFDFDVYG 259