Pairwise Alignments

Query, 260 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 243 a.a., arginine transporter subunit (NCBI) from Escherichia coli BW25113

 Score =  189 bits (481), Expect = 4e-53
 Identities = 110/252 (43%), Positives = 151/252 (59%), Gaps = 12/252 (4%)

Query: 3   MKKWLVATALIATTISGVTQAKEWKTVRFGIEGAYPPFSWTEADGSLKGFDVDMANALCA 62
           MKK LV  AL+A+   G + A++   + FG+   YPPF    A+  + GFD+D+A ALC 
Sbjct: 1   MKK-LVLAALLASFTFGASAAEK---INFGVSATYPPFESIGANNEIVGFDIDLAKALCK 56

Query: 63  EMQVECKIVPQDWDGIIPSLLARKYDAIIAAMSITEERKKKVDFTGKYAQIPNKFIAKKG 122
           +MQ EC      +D +IPSL  RKYDA+I+ M IT ER K+V FT  Y +     IAKK 
Sbjct: 57  QMQAECTFTNHAFDSLIPSLKFRKYDAVISGMDITPERSKQVSFTTPYYENSAVVIAKK- 115

Query: 123 ADLAFTKEGLKGVKIGVQRATTHDKYITDNYGDTVDIVRYGSFDEAYLDLANGRIAAVLG 182
            D   T   LKG +IG++  TTH KYI D + + V  V Y S+  A++DL NGRI  V G
Sbjct: 116 -DTYKTFADLKGKRIGMENGTTHQKYIQDQHPE-VKTVSYDSYQNAFIDLKNGRIDGVFG 173

Query: 183 DASALEEGMLNKPG-GDAYEFVGPSLTDPKWFGEGMGIAVRKQDKELTEKLDAAITALRE 241
           D + + E +   P  G A E     +TDP++FG G+GIAVR  +K L EKL+ A+ A++ 
Sbjct: 174 DTAVVNEWLKTNPQLGVATE----KVTDPQYFGTGLGIAVRPDNKALLEKLNNALAAIKA 229

Query: 242 KGIYQQIQAKYF 253
            G YQ+I  ++F
Sbjct: 230 DGTYQKISDQWF 241