Pairwise Alignments

Query, 260 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 260 a.a., lysine/arginine/ornithine ABC transporter substrate-binding protein ArgT from Escherichia coli ECRC62

 Score =  199 bits (506), Expect = 5e-56
 Identities = 103/260 (39%), Positives = 159/260 (61%), Gaps = 2/260 (0%)

Query: 3   MKKWLVATAL-IATTISGVTQAKEWKTVRFGIEGAYPPFSWTEADGSLKGFDVDMANALC 61
           MKK ++A +L +  + +  + A   +TVR G +  Y PFS  +A G   GFD+D+ N +C
Sbjct: 1   MKKSILALSLLVGLSAAASSYAALPETVRIGTDTTYAPFSSKDAKGDFVGFDIDLGNEMC 60

Query: 62  AEMQVECKIVPQDWDGIIPSLLARKYDAIIAAMSITEERKKKVDFTGKYAQIPNKFIAKK 121
             MQV+C  V  D+D +IPSL A+K DAII+++SIT++R++++ F+ K     ++ IA K
Sbjct: 61  KRMQVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKRQQEIAFSDKLYAADSRLIAAK 120

Query: 122 GADLAFTKEGLKGVKIGVQRATTHDKYITDNY-GDTVDIVRYGSFDEAYLDLANGRIAAV 180
           G+ +  T + LKG  +GV + +T + Y  + +    VD+V Y + D  Y DLA GR+ A 
Sbjct: 121 GSPIQPTLDSLKGKHVGVLQGSTQEAYANETWRSKGVDVVAYANQDLVYSDLAAGRLDAA 180

Query: 181 LGDASALEEGMLNKPGGDAYEFVGPSLTDPKWFGEGMGIAVRKQDKELTEKLDAAITALR 240
           L D  A  EG L +P G  + F G S+ D K+FG+G G+ +RK D ELT   + A+  LR
Sbjct: 181 LQDEVAASEGFLKQPAGKDFAFAGSSVKDKKYFGDGTGVGLRKDDAELTAAFNKALGELR 240

Query: 241 EKGIYQQIQAKYFKYDVYGE 260
           + G Y ++  KYF ++VYG+
Sbjct: 241 QDGTYDKMAKKYFDFNVYGD 260