Pairwise Alignments

Query, 260 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 260 a.a., Histidine-binding periplasmic protein from Escherichia fergusonii Becca

 Score =  189 bits (479), Expect = 7e-53
 Identities = 99/259 (38%), Positives = 150/259 (57%), Gaps = 2/259 (0%)

Query: 3   MKKWLVATALIATTISGVTQ-AKEWKTVRFGIEGAYPPFSWTEADGSLKGFDVDMANALC 61
           MKK +++ +L+    S     A   + +R G +  Y PF    + G L GFD+D+A  LC
Sbjct: 1   MKKLVLSLSLVLAFSSATAAFAAIPQNIRIGTDPTYAPFESKNSQGELVGFDIDLAKELC 60

Query: 62  AEMQVECKIVPQDWDGIIPSLLARKYDAIIAAMSITEERKKKVDFTGKYAQIPNKFIAKK 121
             +  +C  V    D +IPSL A+K DAI++++SITE+R++++ FT K   + ++ +  K
Sbjct: 61  KRINTQCTFVENPLDALIPSLKAKKIDAIMSSLSITEKRQQEIAFTDKLYAVDSRLVVAK 120

Query: 122 GADLAFTKEGLKGVKIGVQRATTHDKYITDNYGDT-VDIVRYGSFDEAYLDLANGRIAAV 180
            +D+  T E LKG +IGV + TT + +  +++    ++IV Y   D  Y DL  GRI A 
Sbjct: 121 NSDIQPTVESLKGKRIGVLQGTTQETFGNEHWAPKGIEIVSYQGQDNIYSDLTAGRIDAA 180

Query: 181 LGDASALEEGMLNKPGGDAYEFVGPSLTDPKWFGEGMGIAVRKQDKELTEKLDAAITALR 240
             D  A  EG L +P G  Y+F GPS+ D K FG G G+ +RK+D EL E L+ A   +R
Sbjct: 181 FQDEVAASEGFLKQPVGKDYKFGGPSVKDEKLFGVGTGMGLRKEDNELREALNKAFAEMR 240

Query: 241 EKGIYQQIQAKYFKYDVYG 259
             G Y+++  KYF +DVYG
Sbjct: 241 ADGTYEKLAKKYFDFDVYG 259