Pairwise Alignments

Query, 260 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 243 a.a., arginine ABC transporter substrate-binding protein from Dickeya dadantii 3937

 Score =  186 bits (472), Expect = 4e-52
 Identities = 104/254 (40%), Positives = 152/254 (59%), Gaps = 14/254 (5%)

Query: 3   MKKWLVATALIATTISGVTQAKEWKTVRFGIEGAYPPFSWTEADGSLKGFDVDMANALCA 62
           MKK  VA  L   ++S    A   +T+RF  E +YPPF   +A   + GFD+D+ANALC 
Sbjct: 1   MKKLFVAALLGGLSLS----AGAAETIRFATEASYPPFESVDASNQIVGFDIDLANALCK 56

Query: 63  EMQVECKIVPQDWDGIIPSLLARKYDAIIAAMSITEERKKKVDFTGKYAQIPNKFIAKKG 122
           ++Q  C    Q +D +IP L  R++DA+IA M IT ER+++V FT  Y +    FIA+KG
Sbjct: 57  QIQATCTFSNQAFDSLIPGLKFRRFDAVIAGMDITPERQQQVSFTQPYYENSALFIAQKG 116

Query: 123 --ADLAFTKEGLKGVKIGVQRATTHDKYITDNYGDTVDIVRYGSFDEAYLDLANGRIAAV 180
             AD+A     LKG ++GVQ  TTH K++ D + D + +V Y S+  A LDL NGR+ AV
Sbjct: 117 KLADIA----ALKGKRVGVQNGTTHQKFLLDKHKD-ITVVPYDSYQNAVLDLKNGRLDAV 171

Query: 181 LGDASALEEGMLNKPGGDAYEFVGPSLTDPKWFGEGMGIAVRKQDKELTEKLDAAITALR 240
            GD + + E +      +    VG  +TD  +FG G+GIAVR+ + EL +K + A+  ++
Sbjct: 172 FGDTAVVNEWLKQ---NENLASVGDKVTDKDYFGIGLGIAVRQNNDELVKKFNDALNNIK 228

Query: 241 EKGIYQQIQAKYFK 254
           + G YQ I  K+F+
Sbjct: 229 QDGTYQTIYKKWFQ 242