Pairwise Alignments

Query, 260 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 249 a.a., arginine ABC transporter substrate-binding protein from Dickeya dadantii 3937

 Score =  182 bits (461), Expect = 8e-51
 Identities = 102/252 (40%), Positives = 145/252 (57%), Gaps = 7/252 (2%)

Query: 3   MKKWLVATALIATTISGVT-QAKEWKTVRFGIEGAYPPFSWTEADGSLKGFDVDMANALC 61
           MKK ++A  L  T  S +T +A    T+RF     YPPF   +A   + GFD+D+ANALC
Sbjct: 1   MKKLVLAALLAGTAFSTMTLRAMAADTIRFAASATYPPFESLDAGNQIVGFDIDLANALC 60

Query: 62  AEMQVECKIVPQDWDGIIPSLLARKYDAIIAAMSITEERKKKVDFTGKYAQIPNKFIAKK 121
            ++Q  C    Q +D +IP+L  R+YDA+I+ M IT ER K+V FT  Y       IA+K
Sbjct: 61  KQLQTTCSFTNQAFDSLIPALKFRRYDAVISGMDITPERSKQVAFTQPYYANSAIVIAQK 120

Query: 122 GADLAFTKEGLKGVKIGVQRATTHDKYITDNYGDTVDIVRYGSFDEAYLDLANGRIAAVL 181
           G     +   LKG +IG++  TTH K++ D + + V  V Y S+  A +DL NGR+  V 
Sbjct: 121 GK--FHSLADLKGKRIGMENGTTHQKFLQDKHPE-VKTVPYDSYQNALIDLKNGRLDGVF 177

Query: 182 GDASALEEGMLNKPGGDAYEFVGPSLTDPKWFGEGMGIAVRKQDKELTEKLDAAITALRE 241
           GD + + E +   P       VG  +TDP +FG G+GIAVR  ++ L EKL+ A+ A++ 
Sbjct: 178 GDTAVVNEWLKINPD---LATVGEKVTDPAYFGIGLGIAVRPDNQALLEKLNGALNAIKA 234

Query: 242 KGIYQQIQAKYF 253
            G YQ I  K+F
Sbjct: 235 DGTYQAINDKWF 246