Pairwise Alignments

Query, 246 a.a., ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 239 a.a., ABC transporter permease from Pseudomonas simiae WCS417

 Score =  157 bits (398), Expect = 1e-43
 Identities = 88/239 (36%), Positives = 138/239 (57%), Gaps = 19/239 (7%)

Query: 6   GYEASILKGALLTIEVAVLSLLLAMLLGMLGALAKMAPYRWARAIATLYTTIIRGIPDLV 65
           G+ +++L GAL+TI +A+  + L + LG+L ALA  +  RW R  AT+++T+ RG+P+L+
Sbjct: 14  GWGSALLAGALVTITLALACIPLGLPLGLLVALAARSKRRWLRTGATVFSTVFRGLPELL 73

Query: 66  LMMLIFFGGQILLNNGLSWFNEFINQWLTARDPNHEWVAYLPDYVDISPFVAGVLTIGFI 125
            +++I++G QI              + L A     E        V I+ FVA ++    +
Sbjct: 74  TLLIIYYGCQIAAQ-----------RMLAAMGYQGE--------VTINTFVAAMIAFSLV 114

Query: 126 FGAYMAETFRGAILAVDKGELEAAKAYGMSAAMSFRRILLPQMIRHAIPGFGNNWLVLLK 185
           F A+ +E +  A  ++ KG+ EAA   G+    + R+++LPQ+ R A+PG  NNWL LLK
Sbjct: 115 FAAFSSEVWLSAFKSLSKGQFEAATMLGLPKGTTLRKVVLPQLTRIALPGLSNNWLSLLK 174

Query: 186 TTALVSIIGLEDMVRISSLAAGSTKMPFTFYMAVAIIFLFFTSVSTGLLKLLERKFSIH 244
            T+LVS I L D++R +SLA   TK P  FY      +LFF+++S  +   LER FS H
Sbjct: 175 DTSLVSTISLVDLMRQTSLAVSVTKEPMLFYAVACFGYLFFSALSGRVFNFLERYFSRH 233