Pairwise Alignments

Query, 246 a.a., ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 222 a.a., amino acid ABC transporter permease from Pseudomonas simiae WCS417

 Score =  131 bits (329), Expect = 1e-35
 Identities = 78/218 (35%), Positives = 121/218 (55%), Gaps = 33/218 (15%)

Query: 11  ILKGALLTIEVAVLSLLLAMLLGMLGALAKMAPYRWARAIATLYTTIIRGIPDLVLMMLI 70
           +L+GA +TI++ VLS LL+  LG++ AL K++P R     A+    +IRG+P +V +  I
Sbjct: 17  LLQGAWVTIQITVLSFLLSSALGLVLALIKLSPIRALSWTASTIINVIRGLPIIVQLFYI 76

Query: 71  FFGGQILLNNGLSWFNEFINQWLTARDPNHEWVAYLPDY-VDISPFVAGVLTIGFIFGAY 129
           +F                                 LPD  V ++ F AGV+ +G  + AY
Sbjct: 77  YF--------------------------------VLPDMGVHLTAFYAGVIGMGIAYSAY 104

Query: 130 MAETFRGAILAVDKGELEAAKAYGMSAAMSFRRILLPQMIRHAIPGFGNNWLVLLKTTAL 189
            AE FR  I+AV++G+ EAA+A GM +A+  RR++LPQ  R A+P +GN  +++LK ++L
Sbjct: 105 QAENFRTGIIAVEQGQREAAEALGMRSALMMRRVILPQAFRIALPPYGNTLVMMLKDSSL 164

Query: 190 VSIIGLEDMVRISSLAAGSTKMPFTFYMAVAIIFLFFT 227
           VS I + +M R   L A ST    T Y  VA+++L  +
Sbjct: 165 VSTITVAEMTRQGQLIASSTFQNMTVYTLVALLYLLMS 202