Pairwise Alignments

Query, 246 a.a., ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 231 a.a., ABC transporter permease from Pseudomonas simiae WCS417

 Score =  177 bits (448), Expect = 2e-49
 Identities = 96/238 (40%), Positives = 148/238 (62%), Gaps = 20/238 (8%)

Query: 3   DLQGYEASILKGALLTIEVAVLSLLLAMLLGMLGALAKMAPYRWARAIATLYTTIIRGIP 62
           DL G+  ++  GAL+T+++A+ +L L ++LG+ GALAK +PY+  + +   Y+TI+RGIP
Sbjct: 4   DLYGFGPALAAGALMTVKLALTALCLGLVLGLAGALAKTSPYKPLQWLGGAYSTIVRGIP 63

Query: 63  DLVLMMLIFFGGQILLNNGLSWFNEFINQWLTARDPNHEWVAYLPDYVDISPFVAGVLTI 122
           +L+ ++LI+FG   L+        EF                  PD + +S F AGV+ +
Sbjct: 64  ELLWVLLIYFGTVNLMRA----LGEFFGN---------------PD-LSLSAFAAGVIAL 103

Query: 123 GFIFGAYMAETFRGAILAVDKGELEAAKAYGMSAAMSFRRILLPQMIRHAIPGFGNNWLV 182
           G  FGAY  E FRGAILA+ KG  EA  A G+S    F R+++PQM R A+PG GN +++
Sbjct: 104 GLCFGAYATEVFRGAILAIPKGHREAGIALGLSKFRIFTRLIMPQMWRIALPGLGNLFMI 163

Query: 183 LLKTTALVSIIGLEDMVRISSLAAGSTKMPFTFYMAVAIIFLFFTSVSTGLLKLLERK 240
           L+K TALVS+IGLE+++R + +    TK PFTF+M  A ++L  T ++   +  LE++
Sbjct: 164 LMKDTALVSVIGLEEIMRHAQIGVTVTKQPFTFFMVAAFMYLGLTVLAMTGMHFLEKR 221