Pairwise Alignments

Query, 246 a.a., ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 234 a.a., ABC transporter permease from Pseudomonas simiae WCS417

 Score =  140 bits (352), Expect = 3e-38
 Identities = 76/238 (31%), Positives = 133/238 (55%), Gaps = 20/238 (8%)

Query: 3   DLQGYEASILKGALLTIEVAVLSLLLAMLLGMLGALAKMAPYRWARAIATLYTTIIRGIP 62
           D QG+  ++LKG  +T++++  S  + +L+G++ A  K++  R    +   YTT+ R +P
Sbjct: 8   DEQGWGNALLKGLWMTLQISAGSFAVGVLIGLVVACLKLSAPRPIALLMRGYTTVFRAVP 67

Query: 63  DLVLMMLIFFGGQILLNNGLSWFNEFINQWLTARDPNHEWVAYLPDYVDISPFVAGVLTI 122
           +L+L++L+++ G + LN  + W                         ++IS  +  +L +
Sbjct: 68  ELLLILLLYYAGSMGLNALMLWMGFA--------------------QMNISGPLVAILVL 107

Query: 123 GFIFGAYMAETFRGAILAVDKGELEAAKAYGMSAAMSFRRILLPQMIRHAIPGFGNNWLV 182
           G + GAY +E FR AILA+  G++EAA+A+G+S    FRR+ LP M   A+ G  N W+ 
Sbjct: 108 GLVQGAYASEIFRAAILAIPHGQIEAARAFGLSGFGLFRRVTLPIMAPFALAGMSNLWIN 167

Query: 183 LLKTTALVSIIGLEDMVRISSLAAGSTKMPFTFYMAVAIIFLFFTSVSTGLLKLLERK 240
           L+K +AL+S++G  +++  +  AAGST+    FY+  A ++   T  S  L   LER+
Sbjct: 168 LIKDSALISVVGTNELLYTAKQAAGSTRQYLLFYLTAAALYYLVTLASNYLSGRLERR 225