Pairwise Alignments

Query, 246 a.a., ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 230 a.a., Amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  183 bits (464), Expect = 3e-51
 Identities = 97/239 (40%), Positives = 154/239 (64%), Gaps = 20/239 (8%)

Query: 2   LDLQGYEASILKGALLTIEVAVLSLLLAMLLGMLGALAKMAPYRWARAIATLYTTIIRGI 61
           +DL G+  +++ G L+T+++A+ +LLL ++LG+LGALAK +P++  + +   Y+T++RG+
Sbjct: 3   IDLHGFGPAMMAGTLMTVKLALCALLLGLVLGLLGALAKTSPFKPLQWLGGFYSTLVRGV 62

Query: 62  PDLVLMMLIFFGGQILLNNGLSWFNEFINQWLTARDPNHEWVAYLPDYVDISPFVAGVLT 121
           P+L+ ++LI+FG   L+N+      E +N               +P  +++S F AGV+ 
Sbjct: 63  PELLWVLLIYFGTVGLMNS----LGEALN---------------MPG-LELSAFAAGVIA 102

Query: 122 IGFIFGAYMAETFRGAILAVDKGELEAAKAYGMSAAMSFRRILLPQMIRHAIPGFGNNWL 181
           +G  FGAY  E FRGAILA+ KG  EA  A G+S      RI+LPQM R A+PG GN ++
Sbjct: 103 LGLCFGAYATEVFRGAILAIPKGHREAGLALGLSKGRILSRIILPQMWRIALPGLGNLFM 162

Query: 182 VLLKTTALVSIIGLEDMVRISSLAAGSTKMPFTFYMAVAIIFLFFTSVSTGLLKLLERK 240
           +L+K TALVS+IGLE+++R S +    TK PFTFYM  A I+L  T ++   +  +E++
Sbjct: 163 ILMKDTALVSVIGLEEIMRHSQIGVTVTKEPFTFYMVAACIYLGLTVLAMTGMHFMEKR 221