Pairwise Alignments

Query, 246 a.a., ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 228 a.a., Histidine ABC transporter, permease protein HisQ (TC 3.A.1.3.1) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  223 bits (569), Expect = 2e-63
 Identities = 117/240 (48%), Positives = 165/240 (68%), Gaps = 20/240 (8%)

Query: 4   LQGYEASILKGALLTIEVAVLSLLLAMLLGMLGALAKMAPYRWARAIATLYTTIIRGIPD 63
           L G+   IL+GA++T+E+A+ S++LA+L+G++GA AK++  R    I   YTT+IRG+PD
Sbjct: 2   LYGFSGVILQGAIVTLELALSSVVLAVLIGLVGAGAKLSQNRVTGLIFEGYTTLIRGVPD 61

Query: 64  LVLMMLIFFGGQILLNNGLSWFNEFINQWLTARDPNHEWVAYLPDYVDISPFVAGVLTIG 123
           LVLM+LIF+G QI LN         +   L              D +DI P VAG++T+G
Sbjct: 62  LVLMLLIFYGLQIALN--------VVTDSLGI------------DQIDIDPMVAGIITLG 101

Query: 124 FIFGAYMAETFRGAILAVDKGELEAAKAYGMSAAMSFRRILLPQMIRHAIPGFGNNWLVL 183
           FI+GAY  ETFRGA +AV KG +EAA A+G +   +FRRI+ P M+R+A+PG GNNW V+
Sbjct: 102 FIYGAYFTETFRGAFMAVPKGHIEAATAFGFTHGQTFRRIMFPAMMRYALPGIGNNWQVI 161

Query: 184 LKTTALVSIIGLEDMVRISSLAAGSTKMPFTFYMAVAIIFLFFTSVSTGLLKLLERKFSI 243
           LK TALVS++GLED+V+ + LA  ST  PF F +   +I+L FT+VS G+L LLER++S+
Sbjct: 162 LKATALVSLLGLEDVVKATQLAGKSTWEPFYFAVVCGLIYLVFTTVSNGVLLLLERRYSV 221