Pairwise Alignments

Query, 246 a.a., ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 238 a.a., amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family from Enterobacter asburiae PDN3

 Score =  147 bits (372), Expect = 1e-40
 Identities = 83/231 (35%), Positives = 140/231 (60%), Gaps = 13/231 (5%)

Query: 11  ILKGALLTIEVAVLSLLLAMLLGMLGAL---AKMAPYRWARAIATLYTTIIRGIPDLVLM 67
           +   A +T+ +AV +L++ ++L M  A+   AK  P  W     +   T++RG+P+++++
Sbjct: 7   LASAAGMTVGLAVCALIIGLVLAMFFAVWESAKWFPVAWT---GSALVTVLRGLPEILVV 63

Query: 68  MLIFFGGQILLNNGLSWFNEFINQWLTARDPNHEWVAYLPDYVDISPFVAGVLTIGFIFG 127
           + I+FG   LL   L+  + F      A+ P    V    +  D+SPF+ GV+ +  ++ 
Sbjct: 64  LFIYFGSSQLL---LTLSDGFTINLGFAQIP----VQMQIENFDVSPFLCGVIALSLLYS 116

Query: 128 AYMAETFRGAILAVDKGELEAAKAYGMSAAMSFRRILLPQMIRHAIPGFGNNWLVLLKTT 187
           AY ++T RGA+ AV +G+ E+ +A G+S +  F R+++PQM RHA+PG GN WLVLLK T
Sbjct: 117 AYASQTLRGALKAVPQGQWESGQALGLSKSAIFFRLVMPQMWRHALPGLGNQWLVLLKDT 176

Query: 188 ALVSIIGLEDMVRISSLAAGSTKMPFTFYMAVAIIFLFFTSVSTGLLKLLE 238
           ALVS+I + D++  +   A  T+ PFT+Y+  A I+L  T +S  +LK ++
Sbjct: 177 ALVSLISVNDLMLQTKSIATRTQEPFTWYIVAAAIYLVITLLSQYILKRID 227