Pairwise Alignments

Query, 246 a.a., ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 222 a.a., amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family from Enterobacter asburiae PDN3

 Score =  110 bits (274), Expect = 3e-29
 Identities = 64/237 (27%), Positives = 119/237 (50%), Gaps = 33/237 (13%)

Query: 11  ILKGALLTIEVAVLSLLLAMLLGMLGALAKMAPYRWARAIATLYTTIIRGIPDLVLMMLI 70
           +LKGA+ T+++++  +   ++LG + AL +M+P    R +A  Y ++ RG P +  + +I
Sbjct: 15  LLKGAVFTLQLSIGGMFFGLVLGFVLALMRMSPVLPVRWLARFYISVFRGTPLIAQLFMI 74

Query: 71  FFGGQILLNNGLSWFNEFINQWLTARDPNHEWVAYLPDY-VDISPFVAGVLTIGFIFGAY 129
           ++G                                LP + +++ P  A ++ +     AY
Sbjct: 75  YYG--------------------------------LPQFGIELDPIPAAMIGLSLNTAAY 102

Query: 130 MAETFRGAILAVDKGELEAAKAYGMSAAMSFRRILLPQMIRHAIPGFGNNWLVLLKTTAL 189
            +ET R AI ++DKG+ EAA + GM+   + RR +LPQ  R A+P   N+++ L+K T+L
Sbjct: 103 TSETLRAAISSIDKGQWEAAASIGMTPWQTLRRAILPQAARVALPPLSNSFISLVKDTSL 162

Query: 190 VSIIGLEDMVRISSLAAGSTKMPFTFYMAVAIIFLFFTSVSTGLLKLLERKFSIHTR 246
            + I + ++ R + L    T   FT Y+A ++I+    +V + L    E + +   R
Sbjct: 163 AATIQVPELFRQAQLITSRTLEVFTMYLAASLIYWVMATVLSALQNYFENQLNRQER 219