Pairwise Alignments

Query, 246 a.a., ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 228 a.a., amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family from Enterobacter asburiae PDN3

 Score =  223 bits (569), Expect = 2e-63
 Identities = 116/240 (48%), Positives = 165/240 (68%), Gaps = 20/240 (8%)

Query: 4   LQGYEASILKGALLTIEVAVLSLLLAMLLGMLGALAKMAPYRWARAIATLYTTIIRGIPD 63
           L G+   IL+GAL+T+E+A+ S++LA+L+G+ GA AK++  +    I   YTT+IRG+PD
Sbjct: 2   LYGFSGVILQGALVTLELAISSVVLAVLIGLAGAGAKLSANKPLALIFEGYTTLIRGVPD 61

Query: 64  LVLMMLIFFGGQILLNNGLSWFNEFINQWLTARDPNHEWVAYLPDYVDISPFVAGVLTIG 123
           LVLM+LIF+G QI LN+                       A     +DI P VAG++T+G
Sbjct: 62  LVLMLLIFYGLQIALNSVTD--------------------AMGMGQIDIDPMVAGIITLG 101

Query: 124 FIFGAYMAETFRGAILAVDKGELEAAKAYGMSAAMSFRRILLPQMIRHAIPGFGNNWLVL 183
           FI+GAY  ETFRGA +AV KG +EAA A+G +++ +FRRI+ P M+R+A+PG GNNW V+
Sbjct: 102 FIYGAYFTETFRGAYMAVPKGHIEAATAFGFTSSQTFRRIMFPAMMRYALPGIGNNWQVI 161

Query: 184 LKTTALVSIIGLEDMVRISSLAAGSTKMPFTFYMAVAIIFLFFTSVSTGLLKLLERKFSI 243
           LK TALVS++GLED+V+ + LA  ST  PF F +   +I+L FT+VS G+L LLER++S+
Sbjct: 162 LKATALVSLLGLEDVVKATQLAGKSTWEPFYFAVVCGVIYLVFTTVSNGVLLLLERRYSV 221