Pairwise Alignments

Query, 246 a.a., ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 228 a.a., histidine ABC transporter permease HisQ from Escherichia coli ECRC62

 Score =  221 bits (563), Expect = 1e-62
 Identities = 114/240 (47%), Positives = 162/240 (67%), Gaps = 20/240 (8%)

Query: 4   LQGYEASILKGALLTIEVAVLSLLLAMLLGMLGALAKMAPYRWARAIATLYTTIIRGIPD 63
           L G+   IL+GAL+T+E+A+ S++LA+++G++GA  K++  R +  I   YTT+IRG+PD
Sbjct: 2   LYGFSGVILQGALVTLELAISSVVLAVIIGLIGAGGKLSQNRLSGLIFEGYTTLIRGVPD 61

Query: 64  LVLMMLIFFGGQILLNNGLSWFNEFINQWLTARDPNHEWVAYLPDYVDISPFVAGVLTIG 123
           LVLM+LIF+G QI LN                        A     +DI P VAG++T+G
Sbjct: 62  LVLMLLIFYGLQIALNTVTE--------------------AMGVGQIDIDPMVAGIITLG 101

Query: 124 FIFGAYMAETFRGAILAVDKGELEAAKAYGMSAAMSFRRILLPQMIRHAIPGFGNNWLVL 183
           FI+GAY  ETFRGA +AV KG +EAA A+G +    FRRI+ P M+R+A+PG GNNW V+
Sbjct: 102 FIYGAYFTETFRGAFMAVPKGHIEAATAFGFTRGQVFRRIMFPAMMRYALPGIGNNWQVI 161

Query: 184 LKTTALVSIIGLEDMVRISSLAAGSTKMPFTFYMAVAIIFLFFTSVSTGLLKLLERKFSI 243
           LK+TALVS++GLED+V+ + LA  ST  PF F +   +I+L FT+VS G+L  LER++S+
Sbjct: 162 LKSTALVSLLGLEDVVKATQLAGKSTWEPFYFAIVCGVIYLVFTTVSNGVLLFLERRYSV 221