Pairwise Alignments

Query, 246 a.a., ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 234 a.a., Octopine transport system permease protein OccQ from Azospirillum sp. SherDot2

 Score =  175 bits (443), Expect = 8e-49
 Identities = 93/233 (39%), Positives = 138/233 (59%), Gaps = 19/233 (8%)

Query: 6   GYEASILKGALLTIEVAVLSLLLAMLLGMLGALAKMAPYRWARAIATLYTTIIRGIPDLV 65
           G+   +L G  +T+ VAV +    +L+G LGA AK++       +A +YTTI+RGIP+L+
Sbjct: 11  GWGGQLLMGTAMTVAVAVSAFAFGILVGSLGASAKLSHSLALNVVADVYTTIVRGIPELL 70

Query: 66  LMMLIFFGGQILLNNGLSWFNEFINQWLTARDPNHEWVAYLPDYVDISPFVAGVLTIGFI 125
           ++ L+FFGG  +  +  S F                        VD++ F  GVL +G I
Sbjct: 71  VIYLLFFGGSGVATSIASAFG-------------------YDGRVDLNAFTIGVLAVGLI 111

Query: 126 FGAYMAETFRGAILAVDKGELEAAKAYGMSAAMSFRRILLPQMIRHAIPGFGNNWLVLLK 185
            GAY  E  RGA+ +V  G++EAA+A GMS  +  RR+L+PQ +R A+PG GN W + LK
Sbjct: 112 SGAYSTEVIRGAVQSVPFGQIEAARACGMSRWLILRRVLVPQTLRFALPGLGNVWQLTLK 171

Query: 186 TTALVSIIGLEDMVRISSLAAGSTKMPFTFYMAVAIIFLFFTSVSTGLLKLLE 238
            TALVS+  L +++RI+ LAAG+T+ PF FY   A+++L  T++ST L    E
Sbjct: 172 DTALVSVTALAELMRITHLAAGATRQPFLFYSTAAVLYLMLTTISTALFNRAE 224