Pairwise Alignments

Query, 225 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 236 a.a., Histidine ABC transporter, permease protein HisM (TC 3.A.1.3.1) from Pseudomonas fluorescens GW456-L13

 Score =  187 bits (475), Expect = 1e-52
 Identities = 100/216 (46%), Positives = 136/216 (62%), Gaps = 5/216 (2%)

Query: 13  YLSGLWTTVWLVSLSLVIGLLCAIPLAIARNSKQKWFSLPAWGYIYFLRGTPLLVQLYLI 72
           +++GL  T+WL+S S+  G + +IPL+IAR S   W   P   Y Y  RGTPL +QL + 
Sbjct: 19  HITGLAMTLWLLSASIFFGFVMSIPLSIARVSTNVWVRWPVQFYTYLFRGTPLYIQLLIC 78

Query: 73  YYGMDQWF-----PVKDTLWEHAWFCALVAFILNTSAYTAEIIRGAINGLPKGEVEAAKA 127
           Y G+         PV D  +  A  C ++AF LNT AYT EI  GAI  +  GEVEAAKA
Sbjct: 79  YTGIYSLAAVRAQPVLDAFFRDAMNCTILAFALNTCAYTTEIFAGAIRSMAHGEVEAAKA 138

Query: 128 YGMSRFQTYQRIILPSALRRSLPAYSNEVIFMLHGSAVAGIVTIMDLTGAARLVNSRYYA 187
           YG++ ++ Y  +I+PSALRRSLP YSNEVI MLH + VA   TI D+   AR  NS  + 
Sbjct: 139 YGLTGWKLYTYVIMPSALRRSLPYYSNEVILMLHSTTVAFTATIPDILKVARDANSATFL 198

Query: 188 PFEAFLSAGLFYMALTFIILWCFKQAEQRFLAYLKP 223
            F++F  A L Y+A+TF ++  F+ AE+R+L++L P
Sbjct: 199 TFQSFGIAALIYLAVTFSLVGLFRLAERRWLSFLGP 234