Pairwise Alignments

Query, 225 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 232 a.a., nickel permease from Pseudomonas simiae WCS417

 Score =  142 bits (357), Expect = 7e-39
 Identities = 76/209 (36%), Positives = 122/209 (58%), Gaps = 8/209 (3%)

Query: 16  GLWTTVWLVSLSLVIGLLCAIPLAIARNSKQKWFSLPAWGYIYFLRGTPLLVQLYLIYYG 75
           GL TT+ L+ +S ++G   A+ +A+AR S++KW +  A  Y   LRGTPLL+Q+Y+ YYG
Sbjct: 15  GLQTTLSLLVISALLGFALAVLVALARLSRRKWLARGAQAYTSVLRGTPLLIQIYIFYYG 74

Query: 76  MDQWFPV-----KDTLWEH---AWFCALVAFILNTSAYTAEIIRGAINGLPKGEVEAAKA 127
           +   F          LW +    ++  + A +L+  AY  E+IRG +  +PKGE+EAA A
Sbjct: 75  LGSLFAQFPMIRGSFLWPYLRDGYWYIVFALVLSVGAYVGEVIRGGLLAVPKGEMEAASA 134

Query: 128 YGMSRFQTYQRIILPSALRRSLPAYSNEVIFMLHGSAVAGIVTIMDLTGAARLVNSRYYA 187
           +GM+  Q   R+ LP A+R  LP  + E + +L  +A+A  + ++DL GAA +V ++   
Sbjct: 135 FGMTPRQALLRVRLPRAMRLLLPTLAGETVMLLKSTALASTIAVVDLLGAANVVRAQTLQ 194

Query: 188 PFEAFLSAGLFYMALTFIILWCFKQAEQR 216
            ++  L     Y+ LTF+I   +  AE+R
Sbjct: 195 IYQPLLLVAAVYLCLTFLIEGVYAIAERR 223